RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 PLEKHG2Q9H7P9 1386 aa20.58■□□□□ 0.88
COL16A1-213ENST00000482910 PLSCR1O15162 318 aa20.57■□□□□ 0.88
COL16A1-213ENST00000482910 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
COL16A1-213ENST00000482910 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
COL16A1-213ENST00000482910 EYA1Q99502 592 aa20.57■□□□□ 0.88
COL16A1-213ENST00000482910 RREB1Q92766 1687 aa20.57■□□□□ 0.88
COL16A1-213ENST00000482910 EZH2Q15910 746 aaKnown RBP20.55■□□□□ 0.88
COL16A1-213ENST00000482910 PKD1L3Q7Z443 1732 aa20.55■□□□□ 0.88
COL16A1-213ENST00000482910 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
COL16A1-213ENST00000482910 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
COL16A1-213ENST00000482910 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
COL16A1-213ENST00000482910 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-213ENST00000482910 KAT6BQ8WYB5 2073 aa20.53■□□□□ 0.88
COL16A1-213ENST00000482910 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
COL16A1-213ENST00000482910 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
COL16A1-213ENST00000482910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL16A1-213ENST00000482910 NUP188Q5SRE5 1749 aa20.51■□□□□ 0.87
COL16A1-213ENST00000482910 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
COL16A1-213ENST00000482910 KCNQ2O43526 872 aa20.5■□□□□ 0.87
COL16A1-213ENST00000482910 MTHFSP49914 203 aa20.5■□□□□ 0.87
COL16A1-213ENST00000482910 BTAF1O14981 1849 aa20.49■□□□□ 0.87
COL16A1-213ENST00000482910 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
COL16A1-213ENST00000482910 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
COL16A1-213ENST00000482910 IL13P35225 146 aa20.48■□□□□ 0.87
COL16A1-213ENST00000482910 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
COL16A1-213ENST00000482910 KDRP35968 1356 aa20.46■□□□□ 0.87
COL16A1-213ENST00000482910 CYP27B1O15528 508 aa20.46■□□□□ 0.87
COL16A1-213ENST00000482910 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-213ENST00000482910 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
COL16A1-213ENST00000482910 NBPF14Q5TI25 921 aa20.43■□□□□ 0.86
COL16A1-213ENST00000482910 PROM2Q8N271 834 aa20.43■□□□□ 0.86
COL16A1-213ENST00000482910 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
COL16A1-213ENST00000482910 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-213ENST00000482910 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
COL16A1-213ENST00000482910 AMOTQ4VCS5 1084 aa20.41■□□□□ 0.86
COL16A1-213ENST00000482910 IFNL2Q8IZJ0 200 aa20.41■□□□□ 0.86
COL16A1-213ENST00000482910 PLEKHO1Q53GL0 409 aaPredicted RBP20.4■□□□□ 0.86
COL16A1-213ENST00000482910 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
COL16A1-213ENST00000482910 TOGARAM1Q9Y4F4 1720 aa20.4■□□□□ 0.86
COL16A1-213ENST00000482910 PHKG2P15735 406 aa20.39■□□□□ 0.85
COL16A1-213ENST00000482910 R3HDM1Q15032 1099 aaKnown RBP20.39■□□□□ 0.85
COL16A1-213ENST00000482910 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
COL16A1-213ENST00000482910 SYTL4Q96C24 671 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-213ENST00000482910 ITGB4P16144 1822 aa20.39■□□□□ 0.85
COL16A1-213ENST00000482910 LY75O60449 1722 aa20.39■□□□□ 0.85
COL16A1-213ENST00000482910 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
COL16A1-213ENST00000482910 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
COL16A1-213ENST00000482910 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
COL16A1-213ENST00000482910 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
COL16A1-213ENST00000482910 CFAP53Q96M91 514 aa20.37■□□□□ 0.85
COL16A1-213ENST00000482910 PAPPAQ13219 1627 aa20.36■□□□□ 0.85
COL16A1-213ENST00000482910 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
COL16A1-213ENST00000482910 LRP5O75197 1615 aa20.35■□□□□ 0.85
COL16A1-213ENST00000482910 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
COL16A1-213ENST00000482910 ZNF530Q6P9A1 599 aaPredicted RBP20.33■□□□□ 0.85
COL16A1-213ENST00000482910 DCAF5Q96JK2 942 aa20.33■□□□□ 0.85
COL16A1-213ENST00000482910 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
COL16A1-213ENST00000482910 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
COL16A1-213ENST00000482910 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
COL16A1-213ENST00000482910 ERVV-2B6SEH9 535 aa20.31■□□□□ 0.84
COL16A1-213ENST00000482910 HMOX1P09601 288 aa20.31■□□□□ 0.84
COL16A1-213ENST00000482910 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
COL16A1-213ENST00000482910 SMARCC1Q92922 1105 aaPredicted RBP20.31■□□□□ 0.84
COL16A1-213ENST00000482910 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
COL16A1-213ENST00000482910 STK32BQ9NY57 414 aa20.31■□□□□ 0.84
COL16A1-213ENST00000482910 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
COL16A1-213ENST00000482910 PIGBQ92521 554 aa20.3■□□□□ 0.84
COL16A1-213ENST00000482910 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
COL16A1-213ENST00000482910 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
COL16A1-213ENST00000482910 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-213ENST00000482910 RALBP1Q15311 655 aa20.29■□□□□ 0.84
COL16A1-213ENST00000482910 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
COL16A1-213ENST00000482910 CASZ1Q86V15 1759 aa20.29■□□□□ 0.84
COL16A1-213ENST00000482910 U2SURPO15042 1029 aaKnown RBP20.28■□□□□ 0.84
COL16A1-213ENST00000482910 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
COL16A1-213ENST00000482910 QSER1Q2KHR3 1735 aa20.27■□□□□ 0.84
COL16A1-213ENST00000482910 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
COL16A1-213ENST00000482910 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
COL16A1-213ENST00000482910 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
COL16A1-213ENST00000482910 ADAMTS7Q9UKP4 1686 aa20.24■□□□□ 0.83
COL16A1-213ENST00000482910 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
COL16A1-213ENST00000482910 C5P01031 1676 aa20.23■□□□□ 0.83
COL16A1-213ENST00000482910 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
COL16A1-213ENST00000482910 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
COL16A1-213ENST00000482910 RSPH6AQ9H0K4 717 aa20.23■□□□□ 0.83
COL16A1-213ENST00000482910 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
COL16A1-213ENST00000482910 FCHSD2O94868 740 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 CABP4P57796 275 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 GAS2L2Q8NHY3 880 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 ASAP1Q9ULH1 1129 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 MRC1P22897 1456 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
COL16A1-213ENST00000482910 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
COL16A1-213ENST00000482910 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL16A1-213ENST00000482910 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
COL16A1-213ENST00000482910 LOC102724428A0A0B4J2F2 783 aa20.2■□□□□ 0.82
COL16A1-213ENST00000482910 KCNQ4P56696 695 aa20.2■□□□□ 0.82
COL16A1-213ENST00000482910 SIK1P57059 783 aa20.2■□□□□ 0.82
COL16A1-213ENST00000482910 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
COL16A1-213ENST00000482910 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms