RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.03
CCDC78-213ENST00000482878 RICTORQ6R327 1708 aa15.27■□□□□ 0.03
CCDC78-213ENST00000482878 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
CCDC78-213ENST00000482878 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-213ENST00000482878 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
CCDC78-213ENST00000482878 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-213ENST00000482878 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
CCDC78-213ENST00000482878 DNTTIP2Q5QJE6 756 aaKnown RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 RBM33Q96EV2 1170 aaKnown RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
CCDC78-213ENST00000482878 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
CCDC78-213ENST00000482878 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
CCDC78-213ENST00000482878 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-213ENST00000482878 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
CCDC78-213ENST00000482878 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
CCDC78-213ENST00000482878 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
CCDC78-213ENST00000482878 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
CCDC78-213ENST00000482878 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-213ENST00000482878 COG3Q96JB2 828 aa15.23■□□□□ 0.03
CCDC78-213ENST00000482878 DLC1Q96QB1 1528 aa15.23■□□□□ 0.03
CCDC78-213ENST00000482878 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
CCDC78-213ENST00000482878 MAP2P11137 1827 aaKnown RBP15.23■□□□□ 0.03
CCDC78-213ENST00000482878 INTS3Q68E01 1043 aaKnown RBP15.22■□□□□ 0.03
CCDC78-213ENST00000482878 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
CCDC78-213ENST00000482878 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
CCDC78-213ENST00000482878 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 APBB1O00213 710 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 PTMSP20962 102 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 TERF1P54274 439 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 PPP1R9BQ96SB3 815 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 CPS1P31327 1500 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
CCDC78-213ENST00000482878 ANKRD44Q8N8A2 993 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 USP26Q9BXU7 913 aa15.21■□□□□ 0.03
CCDC78-213ENST00000482878 CLEC17AQ6ZS10 378 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-213ENST00000482878 DYNC1I1O14576 645 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 CBX1P83916 185 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 RABEP1Q15276 862 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
CCDC78-213ENST00000482878 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-213ENST00000482878 PTMAP06454 111 aaKnown RBP15.19■□□□□ 0.02
CCDC78-213ENST00000482878 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
CCDC78-213ENST00000482878 RGS12O14924 1447 aa15.19■□□□□ 0.02
CCDC78-213ENST00000482878 METP08581 1390 aa15.19■□□□□ 0.02
CCDC78-213ENST00000482878 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
CCDC78-213ENST00000482878 SDSP20132 328 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 DMTNQ08495 405 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 CSPP1Q1MSJ5 1256 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 MCM10Q7L590 875 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 PKP1Q13835 747 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
CCDC78-213ENST00000482878 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
CCDC78-213ENST00000482878 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-213ENST00000482878 MEIS3Q99687 375 aa15.17■□□□□ 0.02
CCDC78-213ENST00000482878 CCDC94Q9BW85 323 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-213ENST00000482878 CHL1O00533 1208 aa15.17■□□□□ 0.02
CCDC78-213ENST00000482878 CAVIN1Q6NZI2 390 aaKnown RBP15.17■□□□□ 0.02
CCDC78-213ENST00000482878 MSH6P52701 1360 aa15.17■□□□□ 0.02
CCDC78-213ENST00000482878 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
CCDC78-213ENST00000482878 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
CCDC78-213ENST00000482878 RTL1A6NKG5 1358 aa15.16■□□□□ 0.02
CCDC78-213ENST00000482878 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
CCDC78-213ENST00000482878 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
CCDC78-213ENST00000482878 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-213ENST00000482878 SETD1AO15047 1707 aaKnown RBP15.15■□□□□ 0.02
CCDC78-213ENST00000482878 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-213ENST00000482878 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
CCDC78-213ENST00000482878 NOL7Q9UMY1 257 aaKnown RBP15.15■□□□□ 0.02
CCDC78-213ENST00000482878 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
CCDC78-213ENST00000482878 NUCB2P80303 420 aa15.14■□□□□ 0.01
CCDC78-213ENST00000482878 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
CCDC78-213ENST00000482878 TSC1Q92574 1164 aa15.14■□□□□ 0.01
CCDC78-213ENST00000482878 GTF2E1P29083 439 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-213ENST00000482878 UTP14CQ5TAP6 766 aaKnown RBP15.13■□□□□ 0.01
CCDC78-213ENST00000482878 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
CCDC78-213ENST00000482878 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
CCDC78-213ENST00000482878 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
CCDC78-213ENST00000482878 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
CCDC78-213ENST00000482878 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-213ENST00000482878 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
CCDC78-213ENST00000482878 CDK11BP21127 795 aaKnown RBP15.12■□□□□ 0.01
CCDC78-213ENST00000482878 NGDNQ8NEJ9 315 aaKnown RBP15.12■□□□□ 0.01
CCDC78-213ENST00000482878 PTPRCP08575 1304 aa15.12■□□□□ 0.01
CCDC78-213ENST00000482878 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
CCDC78-213ENST00000482878 ZNF500O60304 480 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-213ENST00000482878 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-213ENST00000482878 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
CCDC78-213ENST00000482878 ZKSCAN5Q9Y2L8 839 aa15.12■□□□□ 0.01
CCDC78-213ENST00000482878 KIAA0232Q92628 1395 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms