RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
RAPGEF3-210ENST00000482843 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
RAPGEF3-210ENST00000482843 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
RAPGEF3-210ENST00000482843 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 GTF2E1P29083 439 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 USP19O94966 1318 aa14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 HSP90AB1P08238 724 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 HSP90AA2PQ14568 343 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 GSE1Q14687 1217 aa14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 TBC1D32Q96NH3 1257 aa14.94□□□□□ -0.02
RAPGEF3-210ENST00000482843 SMARCA5O60264 1052 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 FKBP5Q13451 457 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 SMC5Q8IY18 1101 aa14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 NLRP1Q9C000 1473 aa14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 ATP7BP35670 1465 aa14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
RAPGEF3-210ENST00000482843 CPS1P31327 1500 aa14.92□□□□□ -0.02
RAPGEF3-210ENST00000482843 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
RAPGEF3-210ENST00000482843 EYA1Q99502 592 aa14.92□□□□□ -0.02
RAPGEF3-210ENST00000482843 NUCB1Q02818 461 aa14.92□□□□□ -0.02
RAPGEF3-210ENST00000482843 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
RAPGEF3-210ENST00000482843 COL3A1P02461 1466 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF3-210ENST00000482843 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
RAPGEF3-210ENST00000482843 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-210ENST00000482843 MEIS3Q99687 375 aa14.9□□□□□ -0.02
RAPGEF3-210ENST00000482843 PLEKHG3A1L390 1219 aa14.9□□□□□ -0.02
RAPGEF3-210ENST00000482843 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
RAPGEF3-210ENST00000482843 G2E3Q7L622 706 aa14.9□□□□□ -0.02
RAPGEF3-210ENST00000482843 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
RAPGEF3-210ENST00000482843 TBX22Q9Y458 520 aa14.88□□□□□ -0.03
RAPGEF3-210ENST00000482843 ZNF853P0CG23 659 aa14.88□□□□□ -0.03
RAPGEF3-210ENST00000482843 AGLP35573 1532 aa14.88□□□□□ -0.03
RAPGEF3-210ENST00000482843 SIRT2Q8IXJ6 389 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 MED14O60244 1454 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 ANKLE2Q86XL3 938 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 EXOC6BQ9Y2D4 811 aa14.87□□□□□ -0.03
RAPGEF3-210ENST00000482843 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 CHL1O00533 1208 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 TEX2Q8IWB9 1127 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 PHF8Q9UPP1 1060 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 SPATA31D1Q6ZQQ2 1576 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 USP32Q8NFA0 1604 aa14.86□□□□□ -0.03
RAPGEF3-210ENST00000482843 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
RAPGEF3-210ENST00000482843 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
RAPGEF3-210ENST00000482843 GNAT3A8MTJ3 354 aa14.85□□□□□ -0.03
RAPGEF3-210ENST00000482843 USP6P35125 1406 aa14.85□□□□□ -0.03
RAPGEF3-210ENST00000482843 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 PLEKHG1Q9ULL1 1385 aa14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 ANXA1P04083 346 aa14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 TRIM6-TRIM34B2RNG4 842 aa14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
RAPGEF3-210ENST00000482843 CDK12Q9NYV4 1490 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF3-210ENST00000482843 HMMRO75330 724 aa14.83□□□□□ -0.04
RAPGEF3-210ENST00000482843 TEFQ10587 303 aa14.83□□□□□ -0.04
RAPGEF3-210ENST00000482843 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
RAPGEF3-210ENST00000482843 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
RAPGEF3-210ENST00000482843 FLT4P35916 1363 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 HOXC9P31274 260 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 CASC1Q6TDU7 716 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 RILPL2Q969X0 211 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 ABCC4O15439 1325 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 PTPRUQ92729 1446 aa14.82□□□□□ -0.04
RAPGEF3-210ENST00000482843 DLC1Q96QB1 1528 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 CDC45O75419 566 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 BMP2KLQ5H9B9 411 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 CCDC30Q5VVM6 783 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 ORAI2Q96SN7 254 aa14.81□□□□□ -0.04
RAPGEF3-210ENST00000482843 ADGRB2O60241 1585 aa14.8□□□□□ -0.04
RAPGEF3-210ENST00000482843 MSH6P52701 1360 aa14.8□□□□□ -0.04
RAPGEF3-210ENST00000482843 FLIIQ13045 1269 aa14.8□□□□□ -0.04
RAPGEF3-210ENST00000482843 CEP85Q6P2H3 762 aa14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 CHMP5Q9NZZ3 219 aa14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 PROSER2Q86WR7 435 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 GNAI2P04899 355 aa14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-210ENST00000482843 VGLL3A8MV65 326 aa14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 FOXD4L5Q5VV16 416 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 FOXD4L4Q8WXT5 416 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 TAF7Q15545 349 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms