RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 KAT6BQ8WYB5 2073 aa23.15■■□□□ 1.3
NELFCD-208ENST00000482747 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
NELFCD-208ENST00000482747 BCL11BQ9C0K0 894 aaPredicted RBP23.13■■□□□ 1.29
NELFCD-208ENST00000482747 MTHFSP49914 203 aa23.12■■□□□ 1.29
NELFCD-208ENST00000482747 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
NELFCD-208ENST00000482747 BCL9O00512 1426 aa23.11■■□□□ 1.29
NELFCD-208ENST00000482747 PSDA5PKW4 1024 aaPredicted RBP23.1■■□□□ 1.29
NELFCD-208ENST00000482747 SYTL4Q96C24 671 aaPredicted RBP23.08■■□□□ 1.29
NELFCD-208ENST00000482747 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
NELFCD-208ENST00000482747 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
NELFCD-208ENST00000482747 NPC1L1Q9UHC9 1359 aa23.06■■□□□ 1.28
NELFCD-208ENST00000482747 CYP27B1O15528 508 aa23.06■■□□□ 1.28
NELFCD-208ENST00000482747 PRIM1P49642 420 aaKnown RBP23.06■■□□□ 1.28
NELFCD-208ENST00000482747 IGSF1Q8N6C5 1336 aa23.06■■□□□ 1.28
NELFCD-208ENST00000482747 PROM2Q8N271 834 aa23.05■■□□□ 1.28
NELFCD-208ENST00000482747 IL13P35225 146 aa23.05■■□□□ 1.28
NELFCD-208ENST00000482747 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
NELFCD-208ENST00000482747 PLSCR1O15162 318 aa23.04■■□□□ 1.28
NELFCD-208ENST00000482747 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
NELFCD-208ENST00000482747 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
NELFCD-208ENST00000482747 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
NELFCD-208ENST00000482747 DOT1LQ8TEK3 1739 aa23.02■■□□□ 1.28
NELFCD-208ENST00000482747 DDX10Q13206 875 aaKnown RBP23.02■■□□□ 1.28
NELFCD-208ENST00000482747 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
NELFCD-208ENST00000482747 RREB1Q92766 1687 aa23.01■■□□□ 1.27
NELFCD-208ENST00000482747 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
NELFCD-208ENST00000482747 BTAF1O14981 1849 aa23■■□□□ 1.27
NELFCD-208ENST00000482747 SPG7Q9UQ90 795 aa23■■□□□ 1.27
NELFCD-208ENST00000482747 NUP188Q5SRE5 1749 aa23■■□□□ 1.27
NELFCD-208ENST00000482747 TXNRD1Q16881 649 aa22.99■■□□□ 1.27
NELFCD-208ENST00000482747 PKD1L3Q7Z443 1732 aa22.99■■□□□ 1.27
NELFCD-208ENST00000482747 HMOX1P09601 288 aa22.99■■□□□ 1.27
NELFCD-208ENST00000482747 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
NELFCD-208ENST00000482747 DIAPH1O60610 1272 aaKnown RBP22.97■■□□□ 1.27
NELFCD-208ENST00000482747 KCNQ4P56696 695 aa22.97■■□□□ 1.27
NELFCD-208ENST00000482747 ANO8Q9HCE9 1232 aaPredicted RBP22.97■■□□□ 1.27
NELFCD-208ENST00000482747 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
NELFCD-208ENST00000482747 MPRIPQ6WCQ1 1025 aa22.96■■□□□ 1.27
NELFCD-208ENST00000482747 PHKG2P15735 406 aa22.95■■□□□ 1.26
NELFCD-208ENST00000482747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.261e-7■□□□□ 10.6
NELFCD-208ENST00000482747 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
NELFCD-208ENST00000482747 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
NELFCD-208ENST00000482747 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
NELFCD-208ENST00000482747 NBPF14Q5TI25 921 aa22.94■■□□□ 1.26
NELFCD-208ENST00000482747 LRRC4BQ9NT99 713 aa22.94■■□□□ 1.26
NELFCD-208ENST00000482747 TOGARAM1Q9Y4F4 1720 aa22.93■■□□□ 1.26
NELFCD-208ENST00000482747 COL3A1P02461 1466 aaPredicted RBP22.93■■□□□ 1.26
NELFCD-208ENST00000482747 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
NELFCD-208ENST00000482747 KDRP35968 1356 aa22.92■■□□□ 1.26
NELFCD-208ENST00000482747 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
NELFCD-208ENST00000482747 PLEKHO1Q53GL0 409 aaPredicted RBP22.91■■□□□ 1.26
NELFCD-208ENST00000482747 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
NELFCD-208ENST00000482747 PIGBQ92521 554 aa22.89■■□□□ 1.26
NELFCD-208ENST00000482747 PDGFDQ9GZP0 370 aaPredicted RBP22.89■■□□□ 1.26
NELFCD-208ENST00000482747 ITGB4P16144 1822 aa22.88■■□□□ 1.25
NELFCD-208ENST00000482747 AMOTQ4VCS5 1084 aa22.87■■□□□ 1.25
NELFCD-208ENST00000482747 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
NELFCD-208ENST00000482747 ZNF827Q17R98 1081 aa22.85■■□□□ 1.25
NELFCD-208ENST00000482747 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
NELFCD-208ENST00000482747 STK32BQ9NY57 414 aa22.84■■□□□ 1.25
NELFCD-208ENST00000482747 TMOD3Q9NYL9 352 aa22.84■■□□□ 1.25
NELFCD-208ENST00000482747 CCNL1Q9UK58 526 aaPredicted RBP22.84■■□□□ 1.25
NELFCD-208ENST00000482747 SLC15A2Q16348 729 aa22.83■■□□□ 1.25
NELFCD-208ENST00000482747 MTHFSDQ2M296 383 aaKnown RBP22.83■■□□□ 1.25
NELFCD-208ENST00000482747 ASAP1Q9ULH1 1129 aa22.83■■□□□ 1.25
NELFCD-208ENST00000482747 KDM6AO15550 1401 aaPredicted RBP22.83■■□□□ 1.25
NELFCD-208ENST00000482747 PALLDQ8WX93 1383 aa22.82■■□□□ 1.24
NELFCD-208ENST00000482747 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
NELFCD-208ENST00000482747 LY75O60449 1722 aa22.81■■□□□ 1.24
NELFCD-208ENST00000482747 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
NELFCD-208ENST00000482747 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
NELFCD-208ENST00000482747 U2AF1L5P0DN76 240 aaPredicted RBP22.8■■□□□ 1.24
NELFCD-208ENST00000482747 U2AF1Q01081 240 aaKnown RBP eCLIP22.8■■□□□ 1.243e-8■□□□□ 9.2
NELFCD-208ENST00000482747 PAPPAQ13219 1627 aa22.8■■□□□ 1.24
NELFCD-208ENST00000482747 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
NELFCD-208ENST00000482747 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
NELFCD-208ENST00000482747 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
NELFCD-208ENST00000482747 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
NELFCD-208ENST00000482747 CABP4P57796 275 aa22.78■■□□□ 1.24
NELFCD-208ENST00000482747 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
NELFCD-208ENST00000482747 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
NELFCD-208ENST00000482747 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
NELFCD-208ENST00000482747 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
NELFCD-208ENST00000482747 AKT1S1Q96B36 256 aa22.77■■□□□ 1.24
NELFCD-208ENST00000482747 RSPH6AQ9H0K4 717 aa22.77■■□□□ 1.24
NELFCD-208ENST00000482747 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.23
NELFCD-208ENST00000482747 ZBTB7AO95365 584 aa22.77■■□□□ 1.23
NELFCD-208ENST00000482747 RALBP1Q15311 655 aa22.75■■□□□ 1.23
NELFCD-208ENST00000482747 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
NELFCD-208ENST00000482747 TFCP2L1Q9NZI6 479 aa22.74■■□□□ 1.23
NELFCD-208ENST00000482747 ATF5Q9Y2D1 282 aaPredicted RBP22.74■■□□□ 1.23
NELFCD-208ENST00000482747 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
NELFCD-208ENST00000482747 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
NELFCD-208ENST00000482747 SIK1P57059 783 aa22.73■■□□□ 1.23
NELFCD-208ENST00000482747 SMIM5Q71RC9 77 aa22.73■■□□□ 1.23
NELFCD-208ENST00000482747 CASZ1Q86V15 1759 aa22.72■■□□□ 1.23
NELFCD-208ENST00000482747 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
NELFCD-208ENST00000482747 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
NELFCD-208ENST00000482747 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
NELFCD-208ENST00000482747 ITPK1Q13572 414 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms