RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 EZH2Q15910 746 aaKnown RBP24.86■■□□□ 1.57
SMIM4-204ENST00000482728 CAMKK2Q96RR4 588 aa24.85■■□□□ 1.57
SMIM4-204ENST00000482728 KCNQ2O43526 872 aa24.84■■□□□ 1.57
SMIM4-204ENST00000482728 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
SMIM4-204ENST00000482728 SPG7Q9UQ90 795 aa24.84■■□□□ 1.57
SMIM4-204ENST00000482728 SBF2Q86WG5 1849 aa24.84■■□□□ 1.57
SMIM4-204ENST00000482728 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
SMIM4-204ENST00000482728 PARD3Q8TEW0 1356 aa24.82■■□□□ 1.56
SMIM4-204ENST00000482728 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
SMIM4-204ENST00000482728 IGSF1Q8N6C5 1336 aa24.82■■□□□ 1.56
SMIM4-204ENST00000482728 PCDH11XQ9BZA7 1347 aa24.82■■□□□ 1.56
SMIM4-204ENST00000482728 PCDH11YQ9BZA8 1340 aa24.82■■□□□ 1.56
SMIM4-204ENST00000482728 NCAPD2Q15021 1401 aa24.81■■□□□ 1.56
SMIM4-204ENST00000482728 PLSCR1O15162 318 aa24.81■■□□□ 1.56
SMIM4-204ENST00000482728 IL13P35225 146 aa24.81■■□□□ 1.56
SMIM4-204ENST00000482728 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
SMIM4-204ENST00000482728 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
SMIM4-204ENST00000482728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.8■■□□□ 1.56
SMIM4-204ENST00000482728 PRIM1P49642 420 aaKnown RBP24.78■■□□□ 1.56
SMIM4-204ENST00000482728 SULT6B1Q6IMI4 303 aa24.78■■□□□ 1.56
SMIM4-204ENST00000482728 CYP27B1O15528 508 aa24.77■■□□□ 1.56
SMIM4-204ENST00000482728 CFAP53Q96M91 514 aa24.77■■□□□ 1.56
SMIM4-204ENST00000482728 PLEKHO1Q53GL0 409 aaPredicted RBP24.76■■□□□ 1.55
SMIM4-204ENST00000482728 PPP2R1AP30153 589 aa24.75■■□□□ 1.55
SMIM4-204ENST00000482728 AEBP1Q8IUX7 1158 aa24.75■■□□□ 1.55
SMIM4-204ENST00000482728 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
SMIM4-204ENST00000482728 AMOTQ4VCS5 1084 aa24.73■■□□□ 1.55
SMIM4-204ENST00000482728 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
SMIM4-204ENST00000482728 NHSQ6T4R5 1651 aa24.72■■□□□ 1.55
SMIM4-204ENST00000482728 PLEKHG2Q9H7P9 1386 aa24.71■■□□□ 1.55
SMIM4-204ENST00000482728 U2SURPO15042 1029 aaKnown RBP24.71■■□□□ 1.55
SMIM4-204ENST00000482728 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
SMIM4-204ENST00000482728 HMOX1P09601 288 aa24.7■■□□□ 1.54
SMIM4-204ENST00000482728 NKX1-1Q15270 411 aaPredicted RBP24.7■■□□□ 1.54
SMIM4-204ENST00000482728 TXNRD1Q16881 649 aa24.7■■□□□ 1.54
SMIM4-204ENST00000482728 PHKG2P15735 406 aa24.69■■□□□ 1.54
SMIM4-204ENST00000482728 PROM2Q8N271 834 aa24.69■■□□□ 1.54
SMIM4-204ENST00000482728 KDRP35968 1356 aa24.68■■□□□ 1.54
SMIM4-204ENST00000482728 PSDA5PKW4 1024 aaPredicted RBP24.68■■□□□ 1.54
SMIM4-204ENST00000482728 R3HDM1Q15032 1099 aaKnown RBP24.68■■□□□ 1.54
SMIM4-204ENST00000482728 ZNF530Q6P9A1 599 aaPredicted RBP24.68■■□□□ 1.54
SMIM4-204ENST00000482728 MPRIPQ6WCQ1 1025 aa24.68■■□□□ 1.54
SMIM4-204ENST00000482728 NUDCQ9Y266 331 aa24.68■■□□□ 1.54
SMIM4-204ENST00000482728 PKD1L3Q7Z443 1732 aa24.68■■□□□ 1.54
SMIM4-204ENST00000482728 HSP90AB1P08238 724 aaKnown RBP24.66■■□□□ 1.54
SMIM4-204ENST00000482728 C1orf141Q5JVX7 400 aa24.66■■□□□ 1.54
SMIM4-204ENST00000482728 BTAF1O14981 1849 aa24.65■■□□□ 1.54
SMIM4-204ENST00000482728 RALBP1Q15311 655 aa24.65■■□□□ 1.54
SMIM4-204ENST00000482728 DOT1LQ8TEK3 1739 aa24.64■■□□□ 1.53
SMIM4-204ENST00000482728 RGPD3A6NKT7 1758 aaPredicted RBP24.63■■□□□ 1.53
SMIM4-204ENST00000482728 RGPD4Q7Z3J3 1758 aa24.63■■□□□ 1.53
SMIM4-204ENST00000482728 COL3A1P02461 1466 aaPredicted RBP24.63■■□□□ 1.53
SMIM4-204ENST00000482728 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
SMIM4-204ENST00000482728 DCAF5Q96JK2 942 aa24.62■■□□□ 1.53
SMIM4-204ENST00000482728 RREB1Q92766 1687 aa24.62■■□□□ 1.53
SMIM4-204ENST00000482728 SLC27A3Q5K4L6 730 aa24.61■■□□□ 1.53
SMIM4-204ENST00000482728 TMOD3Q9NYL9 352 aa24.61■■□□□ 1.53
SMIM4-204ENST00000482728 U2AF1L5P0DN76 240 aaPredicted RBP24.6■■□□□ 1.53
SMIM4-204ENST00000482728 U2AF1Q01081 240 aaKnown RBP eCLIP24.6■■□□□ 1.53
SMIM4-204ENST00000482728 PIGBQ92521 554 aa24.6■■□□□ 1.53
SMIM4-204ENST00000482728 NUP188Q5SRE5 1749 aa24.59■■□□□ 1.53
SMIM4-204ENST00000482728 ERVV-2B6SEH9 535 aa24.59■■□□□ 1.53
SMIM4-204ENST00000482728 SMARCC1Q92922 1105 aaPredicted RBP24.59■■□□□ 1.53
SMIM4-204ENST00000482728 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
SMIM4-204ENST00000482728 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
SMIM4-204ENST00000482728 CABP4P57796 275 aa24.56■■□□□ 1.52
SMIM4-204ENST00000482728 ANO8Q9HCE9 1232 aaPredicted RBP24.56■■□□□ 1.52
SMIM4-204ENST00000482728 LRRC4BQ9NT99 713 aa24.56■■□□□ 1.52
SMIM4-204ENST00000482728 CCNL1Q9UK58 526 aaPredicted RBP24.56■■□□□ 1.52
SMIM4-204ENST00000482728 MTHFSDQ2M296 383 aaKnown RBP24.55■■□□□ 1.52
SMIM4-204ENST00000482728 HMGB2P26583 209 aaKnown RBP24.54■■□□□ 1.52
SMIM4-204ENST00000482728 KCNQ4P56696 695 aa24.54■■□□□ 1.52
SMIM4-204ENST00000482728 SLC15A2Q16348 729 aa24.54■■□□□ 1.52
SMIM4-204ENST00000482728 ITGB4P16144 1822 aa24.54■■□□□ 1.52
SMIM4-204ENST00000482728 FCHSD2O94868 740 aa24.53■■□□□ 1.52
SMIM4-204ENST00000482728 PRKAR2BP31323 418 aa24.53■■□□□ 1.52
SMIM4-204ENST00000482728 PALLDQ8WX93 1383 aa24.53■■□□□ 1.52
SMIM4-204ENST00000482728 GAS2L2Q8NHY3 880 aa24.52■■□□□ 1.52
SMIM4-204ENST00000482728 RSPH6AQ9H0K4 717 aa24.52■■□□□ 1.52
SMIM4-204ENST00000482728 MYBBP1AQ9BQG0 1328 aaKnown RBP24.52■■□□□ 1.52
SMIM4-204ENST00000482728 TOGARAM1Q9Y4F4 1720 aa24.52■■□□□ 1.52
SMIM4-204ENST00000482728 ASAP1Q9ULH1 1129 aa24.51■■□□□ 1.51
SMIM4-204ENST00000482728 NFATC2IPQ8NCF5 419 aa24.5■■□□□ 1.51
SMIM4-204ENST00000482728 NEFMP07197 916 aa24.49■■□□□ 1.51
SMIM4-204ENST00000482728 PHACTR3Q96KR7 559 aa24.49■■□□□ 1.51
SMIM4-204ENST00000482728 KDM6AO15550 1401 aaPredicted RBP24.49■■□□□ 1.51
SMIM4-204ENST00000482728 PRKRIP1Q9H875 184 aaPredicted RBP24.48■■□□□ 1.51
SMIM4-204ENST00000482728 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
SMIM4-204ENST00000482728 ATG3Q9NT62 314 aa24.48■■□□□ 1.51
SMIM4-204ENST00000482728 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
SMIM4-204ENST00000482728 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
SMIM4-204ENST00000482728 LY75O60449 1722 aa24.47■■□□□ 1.51
SMIM4-204ENST00000482728 LOC102724428A0A0B4J2F2 783 aa24.46■■□□□ 1.51
SMIM4-204ENST00000482728 SIK1P57059 783 aa24.46■■□□□ 1.51
SMIM4-204ENST00000482728 TFCP2L1Q9NZI6 479 aa24.46■■□□□ 1.51
SMIM4-204ENST00000482728 ZNF827Q17R98 1081 aa24.45■■□□□ 1.5
SMIM4-204ENST00000482728 AKT1S1Q96B36 256 aa24.45■■□□□ 1.5
SMIM4-204ENST00000482728 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
SMIM4-204ENST00000482728 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
SMIM4-204ENST00000482728 ATP6V1AP38606 617 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms