RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 TMPOP42166 694 aaKnown RBP24.5■■□□□ 1.51
PDGFA-206ENST00000482462 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
PDGFA-206ENST00000482462 COL14A1Q05707 1796 aaKnown RBP24.49■■□□□ 1.51
PDGFA-206ENST00000482462 C20orf194Q5TEA3 1177 aa24.48■■□□□ 1.51
PDGFA-206ENST00000482462 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
PDGFA-206ENST00000482462 PHACTR3Q96KR7 559 aa24.48■■□□□ 1.51
PDGFA-206ENST00000482462 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
PDGFA-206ENST00000482462 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
PDGFA-206ENST00000482462 RRP7AQ9Y3A4 280 aaKnown RBP24.48■■□□□ 1.51
PDGFA-206ENST00000482462 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
PDGFA-206ENST00000482462 NPM2Q86SE8 214 aaKnown RBP24.47■■□□□ 1.51
PDGFA-206ENST00000482462 NFE2L2Q16236 605 aa24.47■■□□□ 1.51
PDGFA-206ENST00000482462 WWC1Q8IX03 1113 aa24.46■■□□□ 1.51
PDGFA-206ENST00000482462 JCADQ9P266 1359 aa24.45■■□□□ 1.5
PDGFA-206ENST00000482462 E9PSI1 815 aa24.45■■□□□ 1.5
PDGFA-206ENST00000482462 COL5A2P05997 1499 aaPredicted RBP24.45■■□□□ 1.5
PDGFA-206ENST00000482462 RIPK4P57078 832 aa24.44■■□□□ 1.5
PDGFA-206ENST00000482462 USHBP1Q8N6Y0 703 aa24.43■■□□□ 1.5
PDGFA-206ENST00000482462 FAM83GA6ND36 823 aa24.42■■□□□ 1.5
PDGFA-206ENST00000482462 CSB-PGBD3P0DP91 1061 aa24.42■■□□□ 1.5
PDGFA-206ENST00000482462 FAM161AQ3B820 660 aa24.42■■□□□ 1.5
PDGFA-206ENST00000482462 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
PDGFA-206ENST00000482462 TRIM35Q9UPQ4 493 aa24.41■■□□□ 1.5
PDGFA-206ENST00000482462 WDR17Q8IZU2 1322 aa24.41■■□□□ 1.5
PDGFA-206ENST00000482462 PLCH1Q4KWH8 1693 aa24.4■■□□□ 1.5
PDGFA-206ENST00000482462 LMOD3Q0VAK6 560 aa24.39■■□□□ 1.5
PDGFA-206ENST00000482462 NLRP2Q9NX02 1062 aa24.39■■□□□ 1.5
PDGFA-206ENST00000482462 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.49
PDGFA-206ENST00000482462 PLEKHG2Q9H7P9 1386 aa24.37■■□□□ 1.49
PDGFA-206ENST00000482462 NWD2Q9ULI1 1742 aa24.36■■□□□ 1.49
PDGFA-206ENST00000482462 PDE3AQ14432 1141 aa24.36■■□□□ 1.49
PDGFA-206ENST00000482462 MTHFSDQ2M296 383 aaKnown RBP24.36■■□□□ 1.49
PDGFA-206ENST00000482462 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
PDGFA-206ENST00000482462 BTG4Q9NY30 223 aa24.35■■□□□ 1.49
PDGFA-206ENST00000482462 RGS17Q9UGC6 210 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-206ENST00000482462 EVA1CP58658 441 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 AAMPQ13685 434 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 C8orf34Q49A92 452 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 NRAPQ86VF7 1730 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 IL16Q14005 1332 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
PDGFA-206ENST00000482462 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
PDGFA-206ENST00000482462 TOM1L2Q6ZVM7 507 aa24.34■■□□□ 1.49
PDGFA-206ENST00000482462 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
PDGFA-206ENST00000482462 ADAMTS2O95450 1211 aa24.33■■□□□ 1.49
PDGFA-206ENST00000482462 VIRMAQ69YN4 1812 aaKnown RBP24.33■■□□□ 1.49
PDGFA-206ENST00000482462 PARP4Q9UKK3 1724 aaKnown RBP24.33■■□□□ 1.48
PDGFA-206ENST00000482462 AMOTQ4VCS5 1084 aa24.32■■□□□ 1.48
PDGFA-206ENST00000482462 CALD1Q05682 793 aaKnown RBP24.31■■□□□ 1.48
PDGFA-206ENST00000482462 PLEKHO1Q53GL0 409 aaPredicted RBP24.31■■□□□ 1.48
PDGFA-206ENST00000482462 RAPGEF4Q8WZA2 1011 aa24.31■■□□□ 1.48
PDGFA-206ENST00000482462 CARD10Q9BWT7 1032 aa24.31■■□□□ 1.48
PDGFA-206ENST00000482462 SPINK5Q9NQ38 1064 aaPredicted RBP24.31■■□□□ 1.48
PDGFA-206ENST00000482462 STRN4Q9NRL3 753 aa24.31■■□□□ 1.48
PDGFA-206ENST00000482462 CRB1P82279 1406 aa24.31■■□□□ 1.48
PDGFA-206ENST00000482462 SOCS7O14512 581 aa24.3■■□□□ 1.48
PDGFA-206ENST00000482462 PKD1L3Q7Z443 1732 aa24.3■■□□□ 1.48
PDGFA-206ENST00000482462 HTATSF1O43719 755 aaKnown RBP24.29■■□□□ 1.48
PDGFA-206ENST00000482462 TATP17735 454 aaPredicted RBP24.29■■□□□ 1.48
PDGFA-206ENST00000482462 LARP1Q6PKG0 1096 aaKnown RBP24.29■■□□□ 1.48
PDGFA-206ENST00000482462 MEGF6O75095 1541 aa24.29■■□□□ 1.48
PDGFA-206ENST00000482462 SLIT2O94813 1529 aa24.28■■□□□ 1.48
PDGFA-206ENST00000482462 LAS1LQ9Y4W2 734 aaKnown RBP24.28■■□□□ 1.48
PDGFA-206ENST00000482462 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
PDGFA-206ENST00000482462 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
PDGFA-206ENST00000482462 MYH16Q9H6N6 1097 aa24.27■■□□□ 1.48
PDGFA-206ENST00000482462 LRRC37A3O60309 1634 aa24.27■■□□□ 1.48
PDGFA-206ENST00000482462 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
PDGFA-206ENST00000482462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.26■■□□□ 1.47
PDGFA-206ENST00000482462 SKAP1Q86WV1 359 aa24.26■■□□□ 1.47
PDGFA-206ENST00000482462 LRP6O75581 1613 aa24.25■■□□□ 1.47
PDGFA-206ENST00000482462 OVOS2A0A0G2JMS6 1433 aa24.25■■□□□ 1.47
PDGFA-206ENST00000482462 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
PDGFA-206ENST00000482462 DCTN1Q14203 1278 aa24.24■■□□□ 1.47
PDGFA-206ENST00000482462 AKAP4Q5JQC9 854 aa24.24■■□□□ 1.47
PDGFA-206ENST00000482462 ZNF530Q6P9A1 599 aaPredicted RBP24.24■■□□□ 1.47
PDGFA-206ENST00000482462 THUMPD2Q9BTF0 503 aaKnown RBP24.24■■□□□ 1.47
PDGFA-206ENST00000482462 IFT57Q9NWB7 429 aa24.23■■□□□ 1.47
PDGFA-206ENST00000482462 SPG7Q9UQ90 795 aa24.23■■□□□ 1.47
PDGFA-206ENST00000482462 MCM10Q7L590 875 aa24.22■■□□□ 1.47
PDGFA-206ENST00000482462 DAXXQ9UER7 740 aaPredicted RBP24.22■■□□□ 1.47
PDGFA-206ENST00000482462 BCAR3O75815 825 aa24.21■■□□□ 1.47
PDGFA-206ENST00000482462 GNAI1P63096 354 aa24.21■■□□□ 1.47
PDGFA-206ENST00000482462 C1orf141Q5JVX7 400 aa24.21■■□□□ 1.47
PDGFA-206ENST00000482462 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.21■■□□□ 1.47
PDGFA-206ENST00000482462 IL2RBP14784 551 aa24.21■■□□□ 1.47
PDGFA-206ENST00000482462 ADAMTS7Q9UKP4 1686 aa24.21■■□□□ 1.47
PDGFA-206ENST00000482462 ZNF853P0CG23 659 aa24.2■■□□□ 1.46
PDGFA-206ENST00000482462 POTEAQ6S8J7 498 aa24.2■■□□□ 1.46
PDGFA-206ENST00000482462 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
PDGFA-206ENST00000482462 CLUAP1Q96AJ1 413 aa24.19■■□□□ 1.46
PDGFA-206ENST00000482462 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
PDGFA-206ENST00000482462 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
PDGFA-206ENST00000482462 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
PDGFA-206ENST00000482462 NGLY1Q96IV0 654 aa24.18■■□□□ 1.46
PDGFA-206ENST00000482462 SCN11AQ9UI33 1791 aa24.18■■□□□ 1.46
PDGFA-206ENST00000482462 DISP2A7MBM2 1401 aa24.17■■□□□ 1.46
PDGFA-206ENST00000482462 FNBP4Q8N3X1 1017 aaPredicted RBP24.17■■□□□ 1.46
PDGFA-206ENST00000482462 IL17REQ8NFR9 667 aa24.17■■□□□ 1.46
PDGFA-206ENST00000482462 UNC5CLQ8IV45 518 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms