RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 TATP17735 454 aaPredicted RBP28.44■■■□□ 2.14
TRA2A-206ENST00000482395 DDX54Q8TDD1 881 aaKnown RBP28.44■■■□□ 2.14
TRA2A-206ENST00000482395 ACSBG1Q96GR2 724 aa28.44■■■□□ 2.14
TRA2A-206ENST00000482395 SRCAPQ6ZRS2 3230 aa28.44■■■□□ 2.14
TRA2A-206ENST00000482395 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
TRA2A-206ENST00000482395 NCAPD2Q15021 1401 aa28.43■■■□□ 2.14
TRA2A-206ENST00000482395 PPM1GO15355 546 aaPredicted RBP28.43■■■□□ 2.14
TRA2A-206ENST00000482395 KCNQ2O43526 872 aa28.43■■■□□ 2.14
TRA2A-206ENST00000482395 POLKQ9UBT6 870 aa28.43■■■□□ 2.14
TRA2A-206ENST00000482395 USHBP1Q8N6Y0 703 aa28.42■■■□□ 2.14
TRA2A-206ENST00000482395 KNSTRNQ9Y448 316 aa28.42■■■□□ 2.14
TRA2A-206ENST00000482395 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
TRA2A-206ENST00000482395 TXNRD1Q16881 649 aa28.39■■■□□ 2.14
TRA2A-206ENST00000482395 PROM2Q8N271 834 aa28.37■■■□□ 2.13
TRA2A-206ENST00000482395 PCDH11XQ9BZA7 1347 aa28.37■■■□□ 2.13
TRA2A-206ENST00000482395 PCDH11YQ9BZA8 1340 aa28.37■■■□□ 2.13
TRA2A-206ENST00000482395 TNNT2P45379 298 aaPredicted RBP28.36■■■□□ 2.13
TRA2A-206ENST00000482395 MORC1Q86VD1 984 aa28.36■■■□□ 2.13
TRA2A-206ENST00000482395 PLEKHG2Q9H7P9 1386 aa28.36■■■□□ 2.13
TRA2A-206ENST00000482395 PAPPAQ13219 1627 aa28.32■■■□□ 2.12
TRA2A-206ENST00000482395 CASZ1Q86V15 1759 aa28.32■■■□□ 2.12
TRA2A-206ENST00000482395 EYA1Q99502 592 aa28.32■■■□□ 2.12
TRA2A-206ENST00000482395 ANO8Q9HCE9 1232 aaPredicted RBP28.32■■■□□ 2.12
TRA2A-206ENST00000482395 LY75O60449 1722 aa28.32■■■□□ 2.12
TRA2A-206ENST00000482395 EIF4A2Q14240 407 aaKnown RBP28.3■■■□□ 2.12
TRA2A-206ENST00000482395 AMER1Q5JTC6 1135 aaPredicted RBP28.3■■■□□ 2.12
TRA2A-206ENST00000482395 SYTL4Q96C24 671 aaPredicted RBP28.3■■■□□ 2.12
TRA2A-206ENST00000482395 STK32BQ9NY57 414 aa28.3■■■□□ 2.12
TRA2A-206ENST00000482395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.29■■■□□ 2.126e-19■■■■□ 21.7
TRA2A-206ENST00000482395 PRIM1P49642 420 aaKnown RBP28.28■■■□□ 2.12
TRA2A-206ENST00000482395 SPG7Q9UQ90 795 aa28.28■■■□□ 2.12
TRA2A-206ENST00000482395 SLC15A2Q16348 729 aa28.27■■■□□ 2.12
TRA2A-206ENST00000482395 SLC27A3Q5K4L6 730 aa28.27■■■□□ 2.12
TRA2A-206ENST00000482395 ITGB4P16144 1822 aa28.27■■■□□ 2.12
TRA2A-206ENST00000482395 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.11
TRA2A-206ENST00000482395 PER1O15534 1290 aaPredicted RBP28.25■■■□□ 2.11
TRA2A-206ENST00000482395 QSER1Q2KHR3 1735 aa28.25■■■□□ 2.11
TRA2A-206ENST00000482395 TOGARAM1Q9Y4F4 1720 aa28.24■■■□□ 2.11
TRA2A-206ENST00000482395 CYP27B1O15528 508 aa28.24■■■□□ 2.11
TRA2A-206ENST00000482395 SPON1Q9HCB6 807 aa28.24■■■□□ 2.11
TRA2A-206ENST00000482395 NPC1L1Q9UHC9 1359 aa28.23■■■□□ 2.11
TRA2A-206ENST00000482395 NKX1-1Q15270 411 aaPredicted RBP28.21■■■□□ 2.11
TRA2A-206ENST00000482395 HMGB2P26583 209 aaKnown RBP28.2■■■□□ 2.1
TRA2A-206ENST00000482395 LRRC4BQ9NT99 713 aa28.19■■■□□ 2.1
TRA2A-206ENST00000482395 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
TRA2A-206ENST00000482395 TAF1LQ8IZX4 1826 aa28.13■■■□□ 2.09
TRA2A-206ENST00000482395 TUBGCP6Q96RT7 1819 aa28.13■■■□□ 2.09
TRA2A-206ENST00000482395 C5P01031 1676 aa28.13■■■□□ 2.09
TRA2A-206ENST00000482395 PHKG2P15735 406 aa28.13■■■□□ 2.09
TRA2A-206ENST00000482395 MPRIPQ6WCQ1 1025 aa28.13■■■□□ 2.09
TRA2A-206ENST00000482395 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
TRA2A-206ENST00000482395 KDRP35968 1356 aa28.12■■■□□ 2.09
TRA2A-206ENST00000482395 AMOTQ4VCS5 1084 aa28.12■■■□□ 2.09
TRA2A-206ENST00000482395 CC2D1BQ5T0F9 858 aaKnown RBP28.12■■■□□ 2.09
TRA2A-206ENST00000482395 SMARCC1Q92922 1105 aaPredicted RBP28.12■■■□□ 2.09
TRA2A-206ENST00000482395 AKT1S1Q96B36 256 aa28.12■■■□□ 2.09
TRA2A-206ENST00000482395 IL13P35225 146 aa28.11■■■□□ 2.09
TRA2A-206ENST00000482395 ZNF827Q17R98 1081 aa28.11■■■□□ 2.09
TRA2A-206ENST00000482395 PLEKHO1Q53GL0 409 aaPredicted RBP28.11■■■□□ 2.09
TRA2A-206ENST00000482395 PPP1R1BQ9UD71 204 aaPredicted RBP28.11■■■□□ 2.09
TRA2A-206ENST00000482395 HSP90AB1P08238 724 aaKnown RBP28.1■■■□□ 2.09
TRA2A-206ENST00000482395 MTHFSP49914 203 aa28.1■■■□□ 2.09
TRA2A-206ENST00000482395 MTFR1LQ9H019 292 aa28.1■■■□□ 2.09
TRA2A-206ENST00000482395 PALLDQ8WX93 1383 aa28.1■■■□□ 2.09
TRA2A-206ENST00000482395 PDGFDQ9GZP0 370 aaPredicted RBP28.09■■■□□ 2.09
TRA2A-206ENST00000482395 ZBTB7AO95365 584 aa28.07■■■□□ 2.08
TRA2A-206ENST00000482395 TMOD3Q9NYL9 352 aa28.07■■■□□ 2.08
TRA2A-206ENST00000482395 SULT6B1Q6IMI4 303 aa28.06■■■□□ 2.08
TRA2A-206ENST00000482395 SLC16A10Q8TF71 515 aa28.06■■■□□ 2.08
TRA2A-206ENST00000482395 COL24A1Q17RW2 1714 aa28.05■■■□□ 2.08
TRA2A-206ENST00000482395 PIGBQ92521 554 aa28.05■■■□□ 2.08
TRA2A-206ENST00000482395 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
TRA2A-206ENST00000482395 DCAF5Q96JK2 942 aa28.04■■■□□ 2.08
TRA2A-206ENST00000482395 TFCP2L1Q9NZI6 479 aa28.04■■■□□ 2.08
TRA2A-206ENST00000482395 ZNF530Q6P9A1 599 aaPredicted RBP28.03■■■□□ 2.08
TRA2A-206ENST00000482395 PNPLA7Q6ZV29 1317 aa28.02■■■□□ 2.08
TRA2A-206ENST00000482395 ERVV-2B6SEH9 535 aa28.02■■■□□ 2.08
TRA2A-206ENST00000482395 DIAPH1O60610 1272 aaKnown RBP28.02■■■□□ 2.08
TRA2A-206ENST00000482395 PTGER2P43116 358 aa28.02■■■□□ 2.08
TRA2A-206ENST00000482395 KCNQ4P56696 695 aa28.02■■■□□ 2.08
TRA2A-206ENST00000482395 C4BP0C0L5 1744 aa28.01■■■□□ 2.07
TRA2A-206ENST00000482395 C1orf141Q5JVX7 400 aa28.01■■■□□ 2.07
TRA2A-206ENST00000482395 ATF5Q9Y2D1 282 aaPredicted RBP28.01■■■□□ 2.07
TRA2A-206ENST00000482395 SCN11AQ9UI33 1791 aa28■■■□□ 2.07
TRA2A-206ENST00000482395 ZNF831Q5JPB2 1677 aa28■■■□□ 2.07
TRA2A-206ENST00000482395 COL3A1P02461 1466 aaPredicted RBP27.99■■■□□ 2.07
TRA2A-206ENST00000482395 VIRMAQ69YN4 1812 aaKnown RBP27.99■■■□□ 2.07
TRA2A-206ENST00000482395 SGIP1Q9BQI5 828 aa27.98■■■□□ 2.07
TRA2A-206ENST00000482395 KDM6AO15550 1401 aaPredicted RBP27.98■■■□□ 2.07
TRA2A-206ENST00000482395 UBR3Q6ZT12 1888 aa27.96■■■□□ 2.07
TRA2A-206ENST00000482395 FLAD1Q8NFF5 587 aa27.96■■■□□ 2.07
TRA2A-206ENST00000482395 LOC102724428A0A0B4J2F2 783 aa27.95■■■□□ 2.06
TRA2A-206ENST00000482395 SIK1P57059 783 aa27.95■■■□□ 2.06
TRA2A-206ENST00000482395 CNGB1Q14028 1251 aaPredicted RBP27.93■■■□□ 2.06
TRA2A-206ENST00000482395 AKAP4Q5JQC9 854 aa27.93■■■□□ 2.06
TRA2A-206ENST00000482395 ASAP1Q9ULH1 1129 aa27.93■■■□□ 2.06
TRA2A-206ENST00000482395 HMOX1P09601 288 aa27.92■■■□□ 2.06
TRA2A-206ENST00000482395 POLD1P28340 1107 aa27.92■■■□□ 2.06
TRA2A-206ENST00000482395 CABP4P57796 275 aa27.92■■■□□ 2.06
TRA2A-206ENST00000482395 CFAP53Q96M91 514 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms