RNA–Protein interactions for RNA: ENST00000482289.5

SFXN5-214, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 895 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-214ENST00000482289 PTF1AQ7RTS3 328 aa27.6■■■□□ 2.01
SFXN5-214ENST00000482289 SHANK3Q9BYB0 1731 aa27.59■■■□□ 2.01
SFXN5-214ENST00000482289 NCAPD2Q15021 1401 aa27.58■■■□□ 2.01
SFXN5-214ENST00000482289 NBPF14Q5TI25 921 aa27.58■■■□□ 2.01
SFXN5-214ENST00000482289 PSDA5PKW4 1024 aaPredicted RBP27.57■■■□□ 2
SFXN5-214ENST00000482289 AMER1Q5JTC6 1135 aaPredicted RBP27.57■■■□□ 2
SFXN5-214ENST00000482289 ACSBG1Q96GR2 724 aa27.57■■■□□ 2
SFXN5-214ENST00000482289 KCNQ2O43526 872 aa27.56■■■□□ 2
SFXN5-214ENST00000482289 R3HDM1Q15032 1099 aaKnown RBP27.54■■■□□ 2
SFXN5-214ENST00000482289 KAT6BQ8WYB5 2073 aa27.54■■■□□ 2
SFXN5-214ENST00000482289 EYA1Q99502 592 aa27.53■■■□□ 2
SFXN5-214ENST00000482289 BTAF1O14981 1849 aa27.53■■■□□ 2
SFXN5-214ENST00000482289 PER1O15534 1290 aaPredicted RBP27.52■■■□□ 2
SFXN5-214ENST00000482289 PCDH11XQ9BZA7 1347 aa27.51■■□□□ 1.99
SFXN5-214ENST00000482289 PCDH11YQ9BZA8 1340 aa27.51■■□□□ 1.99
SFXN5-214ENST00000482289 DOT1LQ8TEK3 1739 aa27.51■■□□□ 1.99
SFXN5-214ENST00000482289 EIF4A2Q14240 407 aaKnown RBP27.51■■□□□ 1.99
SFXN5-214ENST00000482289 PKD1L3Q7Z443 1732 aa27.5■■□□□ 1.99
SFXN5-214ENST00000482289 TXNRD1Q16881 649 aa27.48■■□□□ 1.99
SFXN5-214ENST00000482289 LRP5O75197 1615 aa27.48■■□□□ 1.99
SFXN5-214ENST00000482289 NPC1L1Q9UHC9 1359 aa27.48■■□□□ 1.99
SFXN5-214ENST00000482289 PROM2Q8N271 834 aa27.47■■□□□ 1.99
SFXN5-214ENST00000482289 PLEKHG2Q9H7P9 1386 aa27.47■■□□□ 1.99
SFXN5-214ENST00000482289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.98
SFXN5-214ENST00000482289 SPG7Q9UQ90 795 aa27.45■■□□□ 1.98
SFXN5-214ENST00000482289 IGSF1Q8N6C5 1336 aa27.44■■□□□ 1.98
SFXN5-214ENST00000482289 PRIM1P49642 420 aaKnown RBP27.44■■□□□ 1.98
SFXN5-214ENST00000482289 SYTL4Q96C24 671 aaPredicted RBP27.44■■□□□ 1.98
SFXN5-214ENST00000482289 CC2D1BQ5T0F9 858 aaKnown RBP27.42■■□□□ 1.98
SFXN5-214ENST00000482289 CYP27B1O15528 508 aa27.41■■□□□ 1.98
SFXN5-214ENST00000482289 ANO8Q9HCE9 1232 aaPredicted RBP27.4■■□□□ 1.98
SFXN5-214ENST00000482289 STK32BQ9NY57 414 aa27.38■■□□□ 1.97
SFXN5-214ENST00000482289 MTHFSP49914 203 aa27.37■■□□□ 1.97
SFXN5-214ENST00000482289 SLC27A3Q5K4L6 730 aa27.37■■□□□ 1.97
SFXN5-214ENST00000482289 NKX1-1Q15270 411 aaPredicted RBP27.36■■□□□ 1.97
SFXN5-214ENST00000482289 PAPPAQ13219 1627 aa27.35■■□□□ 1.97
SFXN5-214ENST00000482289 IL13P35225 146 aa27.35■■□□□ 1.97
SFXN5-214ENST00000482289 IFNL2Q8IZJ0 200 aa27.35■■□□□ 1.97
SFXN5-214ENST00000482289 LY75O60449 1722 aa27.35■■□□□ 1.97
SFXN5-214ENST00000482289 TOGARAM1Q9Y4F4 1720 aa27.34■■□□□ 1.97
SFXN5-214ENST00000482289 SLC15A2Q16348 729 aa27.33■■□□□ 1.97
SFXN5-214ENST00000482289 SRCAPQ6ZRS2 3230 aa27.33■■□□□ 1.97
SFXN5-214ENST00000482289 PHKG2P15735 406 aa27.32■■□□□ 1.96
SFXN5-214ENST00000482289 ITGB4P16144 1822 aa27.32■■□□□ 1.96
SFXN5-214ENST00000482289 AMOTQ4VCS5 1084 aa27.31■■□□□ 1.96
SFXN5-214ENST00000482289 PLEKHO1Q53GL0 409 aaPredicted RBP27.31■■□□□ 1.96
SFXN5-214ENST00000482289 KDRP35968 1356 aa27.31■■□□□ 1.96
SFXN5-214ENST00000482289 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
SFXN5-214ENST00000482289 SULT6B1Q6IMI4 303 aa27.3■■□□□ 1.96
SFXN5-214ENST00000482289 LRRC4BQ9NT99 713 aa27.3■■□□□ 1.96
SFXN5-214ENST00000482289 CNGB1Q14028 1251 aaPredicted RBP27.29■■□□□ 1.96
SFXN5-214ENST00000482289 MPRIPQ6WCQ1 1025 aa27.29■■□□□ 1.96
SFXN5-214ENST00000482289 AEBP1Q8IUX7 1158 aa27.28■■□□□ 1.96
SFXN5-214ENST00000482289 DIAPH1O60610 1272 aaKnown RBP27.27■■□□□ 1.96
SFXN5-214ENST00000482289 SPON1Q9HCB6 807 aa27.27■■□□□ 1.96
SFXN5-214ENST00000482289 HSP90AB1P08238 724 aaKnown RBP27.26■■□□□ 1.95
SFXN5-214ENST00000482289 HMGB2P26583 209 aaKnown RBP27.26■■□□□ 1.95
SFXN5-214ENST00000482289 CCNL1Q9UK58 526 aaPredicted RBP27.26■■□□□ 1.95
SFXN5-214ENST00000482289 SMARCC1Q92922 1105 aaPredicted RBP27.25■■□□□ 1.95
SFXN5-214ENST00000482289 PALLDQ8WX93 1383 aa27.24■■□□□ 1.95
SFXN5-214ENST00000482289 ZNF530Q6P9A1 599 aaPredicted RBP27.24■■□□□ 1.95
SFXN5-214ENST00000482289 PIGBQ92521 554 aa27.23■■□□□ 1.95
SFXN5-214ENST00000482289 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
SFXN5-214ENST00000482289 TMOD3Q9NYL9 352 aa27.23■■□□□ 1.95
SFXN5-214ENST00000482289 QSER1Q2KHR3 1735 aa27.23■■□□□ 1.95
SFXN5-214ENST00000482289 COL3A1P02461 1466 aaPredicted RBP27.22■■□□□ 1.95
SFXN5-214ENST00000482289 ZNF827Q17R98 1081 aa27.22■■□□□ 1.95
SFXN5-214ENST00000482289 DCAF5Q96JK2 942 aa27.22■■□□□ 1.95
SFXN5-214ENST00000482289 C1orf141Q5JVX7 400 aa27.21■■□□□ 1.95
SFXN5-214ENST00000482289 PDGFDQ9GZP0 370 aaPredicted RBP27.2■■□□□ 1.94
SFXN5-214ENST00000482289 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
SFXN5-214ENST00000482289 KCNQ4P56696 695 aa27.19■■□□□ 1.94
SFXN5-214ENST00000482289 CFAP53Q96M91 514 aa27.19■■□□□ 1.94
SFXN5-214ENST00000482289 C5P01031 1676 aa27.18■■□□□ 1.94
SFXN5-214ENST00000482289 HMOX1P09601 288 aa27.17■■□□□ 1.94
SFXN5-214ENST00000482289 ZBTB7AO95365 584 aa27.16■■□□□ 1.94
SFXN5-214ENST00000482289 TFCP2L1Q9NZI6 479 aa27.16■■□□□ 1.94
SFXN5-214ENST00000482289 PPP1R1BQ9UD71 204 aaPredicted RBP27.16■■□□□ 1.94
SFXN5-214ENST00000482289 TAF1LQ8IZX4 1826 aa27.16■■□□□ 1.94
SFXN5-214ENST00000482289 KDM6AO15550 1401 aaPredicted RBP27.16■■□□□ 1.94
SFXN5-214ENST00000482289 MTFR1LQ9H019 292 aa27.15■■□□□ 1.94
SFXN5-214ENST00000482289 TUBGCP6Q96RT7 1819 aa27.14■■□□□ 1.94
SFXN5-214ENST00000482289 PPP2R1AP30153 589 aa27.14■■□□□ 1.94
SFXN5-214ENST00000482289 U2SURPO15042 1029 aaKnown RBP27.13■■□□□ 1.93
SFXN5-214ENST00000482289 AKAP4Q5JQC9 854 aa27.13■■□□□ 1.93
SFXN5-214ENST00000482289 SLC16A10Q8TF71 515 aa27.12■■□□□ 1.93
SFXN5-214ENST00000482289 ASAP1Q9ULH1 1129 aa27.12■■□□□ 1.93
SFXN5-214ENST00000482289 PNPLA7Q6ZV29 1317 aa27.12■■□□□ 1.93
SFXN5-214ENST00000482289 LOC102724428A0A0B4J2F2 783 aa27.11■■□□□ 1.93
SFXN5-214ENST00000482289 SIK1P57059 783 aa27.11■■□□□ 1.93
SFXN5-214ENST00000482289 CABP4P57796 275 aa27.11■■□□□ 1.93
SFXN5-214ENST00000482289 ATG3Q9NT62 314 aa27.11■■□□□ 1.93
SFXN5-214ENST00000482289 ATF5Q9Y2D1 282 aaPredicted RBP27.11■■□□□ 1.93
SFXN5-214ENST00000482289 SCN11AQ9UI33 1791 aa27.1■■□□□ 1.93
SFXN5-214ENST00000482289 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
SFXN5-214ENST00000482289 C4BP0C0L5 1744 aa27.08■■□□□ 1.93
SFXN5-214ENST00000482289 ZEB1P37275 1124 aaPredicted RBP27.08■■□□□ 1.93
SFXN5-214ENST00000482289 PTGER2P43116 358 aa27.08■■□□□ 1.93
SFXN5-214ENST00000482289 ZNF831Q5JPB2 1677 aa27.07■■□□□ 1.92
SFXN5-214ENST00000482289 MTHFSDQ2M296 383 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms