RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
IFT88-206ENST00000482172 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
IFT88-206ENST00000482172 LARP1Q6PKG0 1096 aaKnown RBP16.39■□□□□ 0.21
IFT88-206ENST00000482172 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
IFT88-206ENST00000482172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.215e-7■■■■□ 26.3
IFT88-206ENST00000482172 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
IFT88-206ENST00000482172 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
IFT88-206ENST00000482172 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
IFT88-206ENST00000482172 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
IFT88-206ENST00000482172 IL16Q14005 1332 aa16.38■□□□□ 0.21
IFT88-206ENST00000482172 LRP6O75581 1613 aa16.37■□□□□ 0.21
IFT88-206ENST00000482172 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
IFT88-206ENST00000482172 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
IFT88-206ENST00000482172 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
IFT88-206ENST00000482172 E9PSI1 815 aa16.36■□□□□ 0.21
IFT88-206ENST00000482172 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
IFT88-206ENST00000482172 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
IFT88-206ENST00000482172 FBXO41Q8TF61 875 aa16.36■□□□□ 0.21
IFT88-206ENST00000482172 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
IFT88-206ENST00000482172 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
IFT88-206ENST00000482172 MEGF6O75095 1541 aa16.35■□□□□ 0.21
IFT88-206ENST00000482172 PARP4Q9UKK3 1724 aaKnown RBP16.34■□□□□ 0.21
IFT88-206ENST00000482172 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 IL2RBP14784 551 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 THRAP3Q9Y2W1 955 aaKnown RBP16.34■□□□□ 0.21
IFT88-206ENST00000482172 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
IFT88-206ENST00000482172 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
IFT88-206ENST00000482172 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
IFT88-206ENST00000482172 C8orf37Q96NL8 207 aa16.33■□□□□ 0.2
IFT88-206ENST00000482172 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
IFT88-206ENST00000482172 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
IFT88-206ENST00000482172 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
IFT88-206ENST00000482172 ZNF530Q6P9A1 599 aaPredicted RBP16.32■□□□□ 0.2
IFT88-206ENST00000482172 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
IFT88-206ENST00000482172 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.32■□□□□ 0.2
IFT88-206ENST00000482172 DISP2A7MBM2 1401 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 SPATA31A5Q5VU36 1347 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 SPATA31A7Q8IWB4 1347 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
IFT88-206ENST00000482172 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
IFT88-206ENST00000482172 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
IFT88-206ENST00000482172 VPS72Q15906 364 aa16.3■□□□□ 0.2
IFT88-206ENST00000482172 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
IFT88-206ENST00000482172 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
IFT88-206ENST00000482172 GNAI1P63096 354 aa16.29■□□□□ 0.2
IFT88-206ENST00000482172 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
IFT88-206ENST00000482172 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
IFT88-206ENST00000482172 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
IFT88-206ENST00000482172 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 LRRC37A3O60309 1634 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 MCM10Q7L590 875 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 USP21Q9UK80 565 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
IFT88-206ENST00000482172 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
IFT88-206ENST00000482172 PHKG2P15735 406 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
IFT88-206ENST00000482172 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 USP35Q9P2H5 1018 aa16.27■□□□□ 0.2
IFT88-206ENST00000482172 AFF2P51816 1311 aa16.25■□□□□ 0.19
IFT88-206ENST00000482172 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
IFT88-206ENST00000482172 CHL1O00533 1208 aa16.25■□□□□ 0.19
IFT88-206ENST00000482172 CYP27B1O15528 508 aa16.25■□□□□ 0.19
IFT88-206ENST00000482172 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
IFT88-206ENST00000482172 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
IFT88-206ENST00000482172 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
IFT88-206ENST00000482172 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
IFT88-206ENST00000482172 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
IFT88-206ENST00000482172 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
IFT88-206ENST00000482172 ATRNO75882 1429 aa16.23■□□□□ 0.19
IFT88-206ENST00000482172 EXOC5O00471 708 aa16.23■□□□□ 0.19
IFT88-206ENST00000482172 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
IFT88-206ENST00000482172 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
IFT88-206ENST00000482172 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
IFT88-206ENST00000482172 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
IFT88-206ENST00000482172 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
IFT88-206ENST00000482172 TRPC5Q9UL62 973 aaPredicted RBP16.22■□□□□ 0.19
IFT88-206ENST00000482172 SCN11AQ9UI33 1791 aa16.22■□□□□ 0.19
IFT88-206ENST00000482172 KDM6AO15550 1401 aaPredicted RBP16.21■□□□□ 0.19
IFT88-206ENST00000482172 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
IFT88-206ENST00000482172 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
IFT88-206ENST00000482172 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
IFT88-206ENST00000482172 TEFQ10587 303 aa16.2■□□□□ 0.18
IFT88-206ENST00000482172 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
IFT88-206ENST00000482172 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
IFT88-206ENST00000482172 MRC1P22897 1456 aa16.2■□□□□ 0.18
IFT88-206ENST00000482172 ERVV-2B6SEH9 535 aa16.19■□□□□ 0.18
IFT88-206ENST00000482172 EXOSC9Q06265 439 aaKnown RBP16.19■□□□□ 0.18
IFT88-206ENST00000482172 DDB1Q16531 1140 aa16.19■□□□□ 0.18
IFT88-206ENST00000482172 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms