RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 NUP188Q5SRE5 1749 aa20.24■□□□□ 0.83
OPTN-210ENST00000482140 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
OPTN-210ENST00000482140 PLSCR1O15162 318 aa20.23■□□□□ 0.83
OPTN-210ENST00000482140 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
OPTN-210ENST00000482140 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
OPTN-210ENST00000482140 KCNQ2O43526 872 aa20.21■□□□□ 0.83
OPTN-210ENST00000482140 NBPF14Q5TI25 921 aa20.21■□□□□ 0.83
OPTN-210ENST00000482140 R3HDM1Q15032 1099 aaKnown RBP20.2■□□□□ 0.82
OPTN-210ENST00000482140 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
OPTN-210ENST00000482140 BTAF1O14981 1849 aa20.19■□□□□ 0.82
OPTN-210ENST00000482140 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
OPTN-210ENST00000482140 EYA1Q99502 592 aa20.18■□□□□ 0.82
OPTN-210ENST00000482140 DOT1LQ8TEK3 1739 aa20.18■□□□□ 0.82
OPTN-210ENST00000482140 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
OPTN-210ENST00000482140 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
OPTN-210ENST00000482140 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
OPTN-210ENST00000482140 SYTL4Q96C24 671 aaPredicted RBP20.16■□□□□ 0.82
OPTN-210ENST00000482140 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
OPTN-210ENST00000482140 PER1O15534 1290 aaPredicted RBP20.15■□□□□ 0.82
OPTN-210ENST00000482140 PKD1L3Q7Z443 1732 aa20.15■□□□□ 0.82
OPTN-210ENST00000482140 TXNRD1Q16881 649 aa20.14■□□□□ 0.81
OPTN-210ENST00000482140 PRIM1P49642 420 aaKnown RBP20.13■□□□□ 0.81
OPTN-210ENST00000482140 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
OPTN-210ENST00000482140 SPG7Q9UQ90 795 aa20.13■□□□□ 0.81
OPTN-210ENST00000482140 PROM2Q8N271 834 aa20.11■□□□□ 0.81
OPTN-210ENST00000482140 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
OPTN-210ENST00000482140 IGSF1Q8N6C5 1336 aa20.1■□□□□ 0.81
OPTN-210ENST00000482140 LRP5O75197 1615 aa20.09■□□□□ 0.81
OPTN-210ENST00000482140 CYP27B1O15528 508 aa20.08■□□□□ 0.81
OPTN-210ENST00000482140 MTHFSP49914 203 aa20.08■□□□□ 0.81
OPTN-210ENST00000482140 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
OPTN-210ENST00000482140 STK32BQ9NY57 414 aa20.08■□□□□ 0.81
OPTN-210ENST00000482140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■■□□ 14.8
OPTN-210ENST00000482140 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
OPTN-210ENST00000482140 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
OPTN-210ENST00000482140 ITGB4P16144 1822 aa20.04■□□□□ 0.8
OPTN-210ENST00000482140 IL13P35225 146 aa20.04■□□□□ 0.8
OPTN-210ENST00000482140 SLC27A3Q5K4L6 730 aa20.04■□□□□ 0.8
OPTN-210ENST00000482140 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
OPTN-210ENST00000482140 LY75O60449 1722 aa20.03■□□□□ 0.8
OPTN-210ENST00000482140 SLC15A2Q16348 729 aa20.03■□□□□ 0.8
OPTN-210ENST00000482140 PLEKHO1Q53GL0 409 aaPredicted RBP20.03■□□□□ 0.8
OPTN-210ENST00000482140 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
OPTN-210ENST00000482140 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
OPTN-210ENST00000482140 PHKG2P15735 406 aa20.02■□□□□ 0.8
OPTN-210ENST00000482140 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.8
OPTN-210ENST00000482140 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
OPTN-210ENST00000482140 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
OPTN-210ENST00000482140 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
OPTN-210ENST00000482140 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
OPTN-210ENST00000482140 PAPPAQ13219 1627 aa20.01■□□□□ 0.79
OPTN-210ENST00000482140 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
OPTN-210ENST00000482140 CCNL1Q9UK58 526 aaPredicted RBP19.99■□□□□ 0.79
OPTN-210ENST00000482140 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
OPTN-210ENST00000482140 KDRP35968 1356 aa19.98■□□□□ 0.79
OPTN-210ENST00000482140 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
OPTN-210ENST00000482140 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
OPTN-210ENST00000482140 TMOD3Q9NYL9 352 aa19.98■□□□□ 0.79
OPTN-210ENST00000482140 PALLDQ8WX93 1383 aa19.97■□□□□ 0.79
OPTN-210ENST00000482140 KCNQ4P56696 695 aa19.97■□□□□ 0.79
OPTN-210ENST00000482140 C1orf141Q5JVX7 400 aa19.97■□□□□ 0.79
OPTN-210ENST00000482140 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
OPTN-210ENST00000482140 SRCAPQ6ZRS2 3230 aa19.97■□□□□ 0.79
OPTN-210ENST00000482140 HMOX1P09601 288 aa19.96■□□□□ 0.79
OPTN-210ENST00000482140 PIGBQ92521 554 aa19.96■□□□□ 0.79
OPTN-210ENST00000482140 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
OPTN-210ENST00000482140 ZNF827Q17R98 1081 aa19.95■□□□□ 0.78
OPTN-210ENST00000482140 U2SURPO15042 1029 aaKnown RBP19.94■□□□□ 0.78
OPTN-210ENST00000482140 HMGB2P26583 209 aaKnown RBP19.94■□□□□ 0.78
OPTN-210ENST00000482140 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
OPTN-210ENST00000482140 PDGFDQ9GZP0 370 aaPredicted RBP19.94■□□□□ 0.78
OPTN-210ENST00000482140 PPP1R1BQ9UD71 204 aaPredicted RBP19.94■□□□□ 0.78
OPTN-210ENST00000482140 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
OPTN-210ENST00000482140 ZBTB7AO95365 584 aa19.93■□□□□ 0.78
OPTN-210ENST00000482140 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
OPTN-210ENST00000482140 TFCP2L1Q9NZI6 479 aa19.93■□□□□ 0.78
OPTN-210ENST00000482140 C5P01031 1676 aa19.93■□□□□ 0.78
OPTN-210ENST00000482140 QSER1Q2KHR3 1735 aa19.93■□□□□ 0.78
OPTN-210ENST00000482140 ERVV-2B6SEH9 535 aa19.92■□□□□ 0.78
OPTN-210ENST00000482140 TAF1LQ8IZX4 1826 aa19.91■□□□□ 0.78
OPTN-210ENST00000482140 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
OPTN-210ENST00000482140 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
OPTN-210ENST00000482140 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
OPTN-210ENST00000482140 CABP4P57796 275 aa19.9■□□□□ 0.78
OPTN-210ENST00000482140 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
OPTN-210ENST00000482140 AKAP4Q5JQC9 854 aa19.89■□□□□ 0.77
OPTN-210ENST00000482140 MTFR1LQ9H019 292 aa19.89■□□□□ 0.77
OPTN-210ENST00000482140 ASAP1Q9ULH1 1129 aa19.89■□□□□ 0.77
OPTN-210ENST00000482140 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
OPTN-210ENST00000482140 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
OPTN-210ENST00000482140 SCN11AQ9UI33 1791 aa19.88■□□□□ 0.77
OPTN-210ENST00000482140 PNPLA7Q6ZV29 1317 aa19.87■□□□□ 0.77
OPTN-210ENST00000482140 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
OPTN-210ENST00000482140 SIK1P57059 783 aa19.87■□□□□ 0.77
OPTN-210ENST00000482140 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
OPTN-210ENST00000482140 MSH5O43196 834 aa19.86■□□□□ 0.77
OPTN-210ENST00000482140 ATG3Q9NT62 314 aa19.86■□□□□ 0.77
OPTN-210ENST00000482140 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
OPTN-210ENST00000482140 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
OPTN-210ENST00000482140 SLC16A10Q8TF71 515 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms