RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 ZCRB1Q8TBF4 217 aaKnown RBP25.58■■□□□ 1.69
HSPG2-210ENST00000481644 TATP17735 454 aaPredicted RBP25.57■■□□□ 1.68
HSPG2-210ENST00000481644 ACSBG1Q96GR2 724 aa25.57■■□□□ 1.68
HSPG2-210ENST00000481644 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
HSPG2-210ENST00000481644 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
HSPG2-210ENST00000481644 PLSCR1O15162 318 aa25.55■■□□□ 1.68
HSPG2-210ENST00000481644 KCNQ2O43526 872 aa25.55■■□□□ 1.68
HSPG2-210ENST00000481644 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
HSPG2-210ENST00000481644 PSDA5PKW4 1024 aaPredicted RBP25.53■■□□□ 1.68
HSPG2-210ENST00000481644 EIF4A2Q14240 407 aaKnown RBP25.53■■□□□ 1.68
HSPG2-210ENST00000481644 EYA1Q99502 592 aa25.53■■□□□ 1.68
HSPG2-210ENST00000481644 DOT1LQ8TEK3 1739 aa25.52■■□□□ 1.68
HSPG2-210ENST00000481644 BTAF1O14981 1849 aa25.52■■□□□ 1.68
HSPG2-210ENST00000481644 CC2D1BQ5T0F9 858 aaKnown RBP25.5■■□□□ 1.67
HSPG2-210ENST00000481644 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
HSPG2-210ENST00000481644 R3HDM1Q15032 1099 aaKnown RBP25.49■■□□□ 1.67
HSPG2-210ENST00000481644 PCDH11XQ9BZA7 1347 aa25.48■■□□□ 1.67
HSPG2-210ENST00000481644 PCDH11YQ9BZA8 1340 aa25.48■■□□□ 1.67
HSPG2-210ENST00000481644 NBPF14Q5TI25 921 aa25.48■■□□□ 1.67
HSPG2-210ENST00000481644 NPC1L1Q9UHC9 1359 aa25.47■■□□□ 1.67
HSPG2-210ENST00000481644 CNGB1Q14028 1251 aaPredicted RBP25.45■■□□□ 1.66
HSPG2-210ENST00000481644 IGSF1Q8N6C5 1336 aa25.44■■□□□ 1.66
HSPG2-210ENST00000481644 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
HSPG2-210ENST00000481644 SYTL4Q96C24 671 aaPredicted RBP25.44■■□□□ 1.66
HSPG2-210ENST00000481644 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
HSPG2-210ENST00000481644 PROM2Q8N271 834 aa25.43■■□□□ 1.66
HSPG2-210ENST00000481644 SPG7Q9UQ90 795 aa25.43■■□□□ 1.66
HSPG2-210ENST00000481644 CYP27B1O15528 508 aa25.41■■□□□ 1.66
HSPG2-210ENST00000481644 MTHFSP49914 203 aa25.41■■□□□ 1.66
HSPG2-210ENST00000481644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.39■■□□□ 1.66
HSPG2-210ENST00000481644 PLEKHG2Q9H7P9 1386 aa25.38■■□□□ 1.65
HSPG2-210ENST00000481644 LRP5O75197 1615 aa25.37■■□□□ 1.65
HSPG2-210ENST00000481644 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
HSPG2-210ENST00000481644 IL13P35225 146 aa25.37■■□□□ 1.65
HSPG2-210ENST00000481644 ANO8Q9HCE9 1232 aaPredicted RBP25.37■■□□□ 1.65
HSPG2-210ENST00000481644 ITGB4P16144 1822 aa25.35■■□□□ 1.65
HSPG2-210ENST00000481644 AEBP1Q8IUX7 1158 aa25.34■■□□□ 1.65
HSPG2-210ENST00000481644 LY75O60449 1722 aa25.34■■□□□ 1.65
HSPG2-210ENST00000481644 NKX1-1Q15270 411 aaPredicted RBP25.33■■□□□ 1.65
HSPG2-210ENST00000481644 SULT6B1Q6IMI4 303 aa25.33■■□□□ 1.65
HSPG2-210ENST00000481644 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
HSPG2-210ENST00000481644 STK32BQ9NY57 414 aa25.33■■□□□ 1.65
HSPG2-210ENST00000481644 PAPPAQ13219 1627 aa25.33■■□□□ 1.65
HSPG2-210ENST00000481644 PHKG2P15735 406 aa25.32■■□□□ 1.64
HSPG2-210ENST00000481644 PLEKHO1Q53GL0 409 aaPredicted RBP25.31■■□□□ 1.64
HSPG2-210ENST00000481644 KDRP35968 1356 aa25.31■■□□□ 1.64
HSPG2-210ENST00000481644 DIAPH1O60610 1272 aaKnown RBP25.3■■□□□ 1.64
HSPG2-210ENST00000481644 SLC27A3Q5K4L6 730 aa25.3■■□□□ 1.64
HSPG2-210ENST00000481644 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
HSPG2-210ENST00000481644 LRRC4BQ9NT99 713 aa25.3■■□□□ 1.64
HSPG2-210ENST00000481644 SLC15A2Q16348 729 aa25.29■■□□□ 1.64
HSPG2-210ENST00000481644 AMOTQ4VCS5 1084 aa25.29■■□□□ 1.64
HSPG2-210ENST00000481644 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
HSPG2-210ENST00000481644 CASZ1Q86V15 1759 aa25.28■■□□□ 1.64
HSPG2-210ENST00000481644 COL3A1P02461 1466 aaPredicted RBP25.28■■□□□ 1.64
HSPG2-210ENST00000481644 ZNF530Q6P9A1 599 aaPredicted RBP25.27■■□□□ 1.64
HSPG2-210ENST00000481644 HMOX1P09601 288 aa25.25■■□□□ 1.63
HSPG2-210ENST00000481644 HSP90AB1P08238 724 aaKnown RBP25.24■■□□□ 1.63
HSPG2-210ENST00000481644 KCNQ4P56696 695 aa25.24■■□□□ 1.63
HSPG2-210ENST00000481644 PIGBQ92521 554 aa25.24■■□□□ 1.63
HSPG2-210ENST00000481644 CCNL1Q9UK58 526 aaPredicted RBP25.24■■□□□ 1.63
HSPG2-210ENST00000481644 PALLDQ8WX93 1383 aa25.23■■□□□ 1.63
HSPG2-210ENST00000481644 TMOD3Q9NYL9 352 aa25.23■■□□□ 1.63
HSPG2-210ENST00000481644 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
HSPG2-210ENST00000481644 ZNF827Q17R98 1081 aa25.22■■□□□ 1.63
HSPG2-210ENST00000481644 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
HSPG2-210ENST00000481644 CFAP53Q96M91 514 aa25.22■■□□□ 1.63
HSPG2-210ENST00000481644 SMARCC1Q92922 1105 aaPredicted RBP25.21■■□□□ 1.63
HSPG2-210ENST00000481644 DCAF5Q96JK2 942 aa25.21■■□□□ 1.63
HSPG2-210ENST00000481644 PDGFDQ9GZP0 370 aaPredicted RBP25.21■■□□□ 1.63
HSPG2-210ENST00000481644 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
HSPG2-210ENST00000481644 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.62
HSPG2-210ENST00000481644 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
HSPG2-210ENST00000481644 C5P01031 1676 aa25.2■■□□□ 1.62
HSPG2-210ENST00000481644 AKT1S1Q96B36 256 aa25.19■■□□□ 1.62
HSPG2-210ENST00000481644 QSER1Q2KHR3 1735 aa25.19■■□□□ 1.62
HSPG2-210ENST00000481644 KDM6AO15550 1401 aaPredicted RBP25.19■■□□□ 1.62
HSPG2-210ENST00000481644 ERVV-2B6SEH9 535 aa25.18■■□□□ 1.62
HSPG2-210ENST00000481644 TAF1LQ8IZX4 1826 aa25.18■■□□□ 1.62
HSPG2-210ENST00000481644 TUBGCP6Q96RT7 1819 aa25.18■■□□□ 1.62
HSPG2-210ENST00000481644 SCN11AQ9UI33 1791 aa25.16■■□□□ 1.62
HSPG2-210ENST00000481644 ZBTB7AO95365 584 aa25.15■■□□□ 1.62
HSPG2-210ENST00000481644 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
HSPG2-210ENST00000481644 TFCP2L1Q9NZI6 479 aa25.15■■□□□ 1.62
HSPG2-210ENST00000481644 ASAP1Q9ULH1 1129 aa25.15■■□□□ 1.62
HSPG2-210ENST00000481644 HMGB2P26583 209 aaKnown RBP25.14■■□□□ 1.62
HSPG2-210ENST00000481644 CABP4P57796 275 aa25.14■■□□□ 1.62
HSPG2-210ENST00000481644 AKAP4Q5JQC9 854 aa25.14■■□□□ 1.62
HSPG2-210ENST00000481644 NUDCQ9Y266 331 aa25.13■■□□□ 1.61
HSPG2-210ENST00000481644 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
HSPG2-210ENST00000481644 ATG3Q9NT62 314 aa25.12■■□□□ 1.61
HSPG2-210ENST00000481644 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
HSPG2-210ENST00000481644 SIK1P57059 783 aa25.11■■□□□ 1.61
HSPG2-210ENST00000481644 MTHFSDQ2M296 383 aaKnown RBP25.11■■□□□ 1.61
HSPG2-210ENST00000481644 PPP1R1BQ9UD71 204 aaPredicted RBP25.11■■□□□ 1.61
HSPG2-210ENST00000481644 PNPLA7Q6ZV29 1317 aa25.11■■□□□ 1.61
HSPG2-210ENST00000481644 C4BP0C0L5 1744 aa25.1■■□□□ 1.61
HSPG2-210ENST00000481644 MTFR1LQ9H019 292 aa25.1■■□□□ 1.61
HSPG2-210ENST00000481644 ATF5Q9Y2D1 282 aaPredicted RBP25.1■■□□□ 1.61
HSPG2-210ENST00000481644 U2AF1L5P0DN76 240 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms