RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 RGPD2P0DJD1 1756 aa7.86□□□□□ -1.15
TFE3-202ENST00000481606 A0A1W2PP64 1363 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 KCNQ4P56696 695 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
TFE3-202ENST00000481606 NLGN2Q8NFZ4 835 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
TFE3-202ENST00000481606 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 SLC16A10Q8TF71 515 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 SYTL4Q96C24 671 aaPredicted RBP7.85□□□□□ -1.15
TFE3-202ENST00000481606 LTV1Q96GA3 475 aaPredicted RBP7.85□□□□□ -1.15
TFE3-202ENST00000481606 SIN3AQ96ST3 1273 aa7.85□□□□□ -1.15
TFE3-202ENST00000481606 NSD2O96028 1365 aa7.84□□□□□ -1.15
TFE3-202ENST00000481606 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.15
TFE3-202ENST00000481606 MEGF6O75095 1541 aa7.84□□□□□ -1.15
TFE3-202ENST00000481606 C5P01031 1676 aa7.84□□□□□ -1.15
TFE3-202ENST00000481606 TFCP2L1Q9NZI6 479 aa7.84□□□□□ -1.15
TFE3-202ENST00000481606 NEUROD1Q13562 356 aa7.83□□□□□ -1.16
TFE3-202ENST00000481606 SLC12A5Q9H2X9 1139 aa7.83□□□□□ -1.16
TFE3-202ENST00000481606 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
TFE3-202ENST00000481606 YBX3P16989 372 aaKnown RBP eCLIP7.82□□□□□ -1.168e-10■■■■■ 38.6
TFE3-202ENST00000481606 PRIM1P49642 420 aaKnown RBP7.82□□□□□ -1.16
TFE3-202ENST00000481606 MSL1Q68DK7 614 aa7.82□□□□□ -1.16
TFE3-202ENST00000481606 IP6K1Q92551 441 aa7.82□□□□□ -1.16
TFE3-202ENST00000481606 CARD11Q9BXL7 1154 aa7.82□□□□□ -1.16
TFE3-202ENST00000481606 ATP10DQ9P241 1426 aa7.82□□□□□ -1.16
TFE3-202ENST00000481606 CCNL1Q9UK58 526 aaPredicted RBP7.82□□□□□ -1.16
TFE3-202ENST00000481606 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
TFE3-202ENST00000481606 TAF1LQ8IZX4 1826 aa7.81□□□□□ -1.16
TFE3-202ENST00000481606 USP47Q96K76 1375 aa7.81□□□□□ -1.16
TFE3-202ENST00000481606 GRIN3BO60391 1043 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 HOXC9P31274 260 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 AMPHP49418 695 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 COL23A1Q86Y22 540 aaPredicted RBP7.8□□□□□ -1.16
TFE3-202ENST00000481606 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
TFE3-202ENST00000481606 COG3Q96JB2 828 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 RTL1A6NKG5 1358 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 TOGARAM1Q9Y4F4 1720 aa7.8□□□□□ -1.16
TFE3-202ENST00000481606 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
TFE3-202ENST00000481606 C4BP0C0L5 1744 aa7.79□□□□□ -1.16
TFE3-202ENST00000481606 USHBP1Q8N6Y0 703 aa7.79□□□□□ -1.16
TFE3-202ENST00000481606 KIF20BQ96Q89 1820 aa7.78□□□□□ -1.16
TFE3-202ENST00000481606 FBLN1P23142 703 aa7.78□□□□□ -1.16
TFE3-202ENST00000481606 ADCY9O60503 1353 aa7.78□□□□□ -1.16
TFE3-202ENST00000481606 PALLDQ8WX93 1383 aa7.78□□□□□ -1.16
TFE3-202ENST00000481606 ITGB4P16144 1822 aa7.78□□□□□ -1.16
TFE3-202ENST00000481606 UBR3Q6ZT12 1888 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 TONSLQ96HA7 1378 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
TFE3-202ENST00000481606 NBPF6Q5VWK0 638 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 ZNF526Q8TF50 670 aaPredicted RBP7.77□□□□□ -1.17
TFE3-202ENST00000481606 RAPGEF4Q8WZA2 1011 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 NBPF4Q96M43 638 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 GPBP1L1Q9HC44 474 aaPredicted RBP7.77□□□□□ -1.17
TFE3-202ENST00000481606 PKD1L3Q7Z443 1732 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 PCDH11XQ9BZA7 1347 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 PCDH11YQ9BZA8 1340 aa7.77□□□□□ -1.17
TFE3-202ENST00000481606 PUS7Q96PZ0 661 aaKnown RBP7.76□□□□□ -1.17
TFE3-202ENST00000481606 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
TFE3-202ENST00000481606 CD2APQ9Y5K6 639 aa7.76□□□□□ -1.17
TFE3-202ENST00000481606 CGNL1Q0VF96 1302 aa7.76□□□□□ -1.17
TFE3-202ENST00000481606 IGSF1Q8N6C5 1336 aa7.76□□□□□ -1.17
TFE3-202ENST00000481606 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
TFE3-202ENST00000481606 UTRNP46939 3433 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 PHF14O94880 888 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 SLC4A2P04920 1241 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 TATP17735 454 aaPredicted RBP7.75□□□□□ -1.17
TFE3-202ENST00000481606 FLAD1Q8NFF5 587 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 AK7Q96M32 723 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 TESK2Q96S53 571 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 NSD3Q9BZ95 1437 aa7.75□□□□□ -1.17
TFE3-202ENST00000481606 FLT4P35916 1363 aa7.74□□□□□ -1.17
TFE3-202ENST00000481606 MAP2P11137 1827 aaKnown RBP7.74□□□□□ -1.17
TFE3-202ENST00000481606 HSPA6P17066 643 aa7.74□□□□□ -1.17
TFE3-202ENST00000481606 MPRIPQ6WCQ1 1025 aa7.74□□□□□ -1.17
TFE3-202ENST00000481606 AMIGO3Q86WK7 504 aa7.74□□□□□ -1.17
TFE3-202ENST00000481606 GGNBP2Q9H3C7 697 aa7.74□□□□□ -1.17
TFE3-202ENST00000481606 INSRP06213 1382 aa7.73□□□□□ -1.17
TFE3-202ENST00000481606 ANKRD26Q9UPS8 1709 aa7.73□□□□□ -1.17
TFE3-202ENST00000481606 ST20-MTHFSA0A0A6YYL1 179 aa7.73□□□□□ -1.17
TFE3-202ENST00000481606 SMIM5Q71RC9 77 aa7.73□□□□□ -1.17
TFE3-202ENST00000481606 KIAA1551Q9HCM1 1747 aa7.72□□□□□ -1.17
TFE3-202ENST00000481606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
TFE3-202ENST00000481606 FYB1O15117 783 aa7.72□□□□□ -1.17
TFE3-202ENST00000481606 CYP27B1O15528 508 aa7.72□□□□□ -1.17
TFE3-202ENST00000481606 HMGB2P26583 209 aaKnown RBP7.72□□□□□ -1.17
TFE3-202ENST00000481606 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
TFE3-202ENST00000481606 SMARCC1Q92922 1105 aaPredicted RBP7.72□□□□□ -1.17
TFE3-202ENST00000481606 KIF24Q5T7B8 1368 aa7.71□□□□□ -1.17
TFE3-202ENST00000481606 N4BP2Q86UW6 1770 aaPredicted RBP7.71□□□□□ -1.17
TFE3-202ENST00000481606 KIF13BQ9NQT8 1826 aa7.71□□□□□ -1.17
TFE3-202ENST00000481606 NCAPD2Q15021 1401 aa7.71□□□□□ -1.17
TFE3-202ENST00000481606 PXDNLA1KZ92 1463 aa7.71□□□□□ -1.18
TFE3-202ENST00000481606 GNPATO15228 680 aa7.71□□□□□ -1.18
TFE3-202ENST00000481606 MYCNP04198 464 aaPredicted RBP7.71□□□□□ -1.18
TFE3-202ENST00000481606 SSFA2P28290 1259 aa7.71□□□□□ -1.18
TFE3-202ENST00000481606 LINC00116Q8NCU8 138 aa7.71□□□□□ -1.18
TFE3-202ENST00000481606 KIF3CO14782 793 aa7.7□□□□□ -1.18
TFE3-202ENST00000481606 PIGBQ92521 554 aa7.7□□□□□ -1.18
TFE3-202ENST00000481606 EMILIN1Q9Y6C2 1016 aa7.7□□□□□ -1.18
TFE3-202ENST00000481606 LOC102724428A0A0B4J2F2 783 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms