RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-211	ENST00000481492	ACSBG1	Q96GR2	724 aa		28.12	■■■□□ 2.09
PTPN18-211	ENST00000481492	PLSCR1	O15162	318 aa		28.11	■■■□□ 2.09
PTPN18-211	ENST00000481492	RAPGEF4	Q8WZA2	1011 aa		28.11	■■■□□ 2.09
PTPN18-211	ENST00000481492	CC2D1B	Q5T0F9	858 aa	Known RBP	28.1	■■■□□ 2.09
PTPN18-211	ENST00000481492	PROM2	Q8N271	834 aa		28.1	■■■□□ 2.09
PTPN18-211	ENST00000481492	PARD3	Q8TEW0	1356 aa		28.09	■■■□□ 2.09
PTPN18-211	ENST00000481492	PSD	A5PKW4	1024 aa	Predicted RBP	28.09	■■■□□ 2.09
PTPN18-211	ENST00000481492	SHANK3	Q9BYB0	1731 aa		28.08	■■■□□ 2.09
PTPN18-211	ENST00000481492	TAT	P17735	454 aa	Predicted RBP	28.08	■■■□□ 2.09
PTPN18-211	ENST00000481492	NPC1L1	Q9UHC9	1359 aa		28.04	■■■□□ 2.08
PTPN18-211	ENST00000481492	RREB1	Q92766	1687 aa		28.04	■■■□□ 2.08
PTPN18-211	ENST00000481492	NHS	Q6T4R5	1651 aa		28.03	■■■□□ 2.08
PTPN18-211	ENST00000481492	CYP27B1	O15528	508 aa		28.02	■■■□□ 2.08
PTPN18-211	ENST00000481492	MTHFS	P49914	203 aa		28.02	■■■□□ 2.08
PTPN18-211	ENST00000481492	CNGB1	Q14028	1251 aa	Predicted RBP	28.02	■■■□□ 2.08
PTPN18-211	ENST00000481492	R3HDM1	Q15032	1099 aa	Known RBP	28.02	■■■□□ 2.08
PTPN18-211	ENST00000481492	IGSF1	Q8N6C5	1336 aa		28.01	■■■□□ 2.07
PTPN18-211	ENST00000481492	PRIM1	P49642	420 aa	Known RBP	28	■■■□□ 2.07
PTPN18-211	ENST00000481492	NUP188	Q5SRE5	1749 aa		28	■■■□□ 2.07
PTPN18-211	ENST00000481492	IL13	P35225	146 aa		27.99	■■■□□ 2.07
PTPN18-211	ENST00000481492	TXNRD1	Q16881	649 aa		27.98	■■■□□ 2.07
PTPN18-211	ENST00000481492	PCDH11X	Q9BZA7	1347 aa		27.96	■■■□□ 2.07
PTPN18-211	ENST00000481492	PCDH11Y	Q9BZA8	1340 aa		27.96	■■■□□ 2.07
PTPN18-211	ENST00000481492	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.96	■■■□□ 2.07
PTPN18-211	ENST00000481492	RGPD4	Q7Z3J3	1758 aa		27.96	■■■□□ 2.07
PTPN18-211	ENST00000481492	AEBP1	Q8IUX7	1158 aa		27.96	■■■□□ 2.07
PTPN18-211	ENST00000481492	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.95	■■■□□ 2.06
PTPN18-211	ENST00000481492	BTAF1	O14981	1849 aa		27.94	■■■□□ 2.06
PTPN18-211	ENST00000481492	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.94	■■■□□ 2.06
PTPN18-211	ENST00000481492	PKD1L3	Q7Z443	1732 aa		27.94	■■■□□ 2.06
PTPN18-211	ENST00000481492	KAT6B	Q8WYB5	2073 aa		27.94	■■■□□ 2.06
PTPN18-211	ENST00000481492	SYTL4	Q96C24	671 aa	Predicted RBP	27.93	■■■□□ 2.06
PTPN18-211	ENST00000481492	NKX1-1	Q15270	411 aa	Predicted RBP	27.92	■■■□□ 2.06
PTPN18-211	ENST00000481492	SPG7	Q9UQ90	795 aa		27.92	■■■□□ 2.06
PTPN18-211	ENST00000481492	NBPF14	Q5TI25	921 aa		27.91	■■■□□ 2.06
PTPN18-211	ENST00000481492	DOT1L	Q8TEK3	1739 aa		27.91	■■■□□ 2.06
PTPN18-211	ENST00000481492	LRRC4B	Q9NT99	713 aa		27.9	■■■□□ 2.06
PTPN18-211	ENST00000481492	SULT6B1	Q6IMI4	303 aa		27.88	■■■□□ 2.05
PTPN18-211	ENST00000481492	PHKG2	P15735	406 aa		27.87	■■■□□ 2.05
PTPN18-211	ENST00000481492	KDR	P35968	1356 aa		27.87	■■■□□ 2.05
PTPN18-211	ENST00000481492	KCNQ4	P56696	695 aa		27.85	■■■□□ 2.05
PTPN18-211	ENST00000481492	IFNL2	Q8IZJ0	200 aa		27.85	■■■□□ 2.05
PTPN18-211	ENST00000481492	PLEKHG2	Q9H7P9	1386 aa		27.84	■■■□□ 2.05
PTPN18-211	ENST00000481492	TOGARAM1	Q9Y4F4	1720 aa		27.84	■■■□□ 2.05
PTPN18-211	ENST00000481492	COL3A1	P02461	1466 aa	Predicted RBP	27.84	■■■□□ 2.05
PTPN18-211	ENST00000481492	DIAPH1	O60610	1272 aa	Known RBP	27.84	■■■□□ 2.05
PTPN18-211	ENST00000481492	MPRIP	Q6WCQ1	1025 aa		27.83	■■■□□ 2.05
PTPN18-211	ENST00000481492	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.83	■■■□□ 2.05
PTPN18-211	ENST00000481492	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.82	■■■□□ 2.04
PTPN18-211	ENST00000481492	PPP2R1A	P30153	589 aa		27.81	■■■□□ 2.04
PTPN18-211	ENST00000481492	PIGB	Q92521	554 aa		27.81	■■■□□ 2.04
PTPN18-211	ENST00000481492	HMOX1	P09601	288 aa		27.8	■■■□□ 2.04
PTPN18-211	ENST00000481492	SLC15A2	Q16348	729 aa		27.8	■■■□□ 2.04
PTPN18-211	ENST00000481492	AMOT	Q4VCS5	1084 aa		27.79	■■■□□ 2.04
PTPN18-211	ENST00000481492	ZNF827	Q17R98	1081 aa		27.78	■■■□□ 2.04
PTPN18-211	ENST00000481492	SLC27A3	Q5K4L6	730 aa		27.78	■■■□□ 2.04
PTPN18-211	ENST00000481492	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.78	■■■□□ 2.04
PTPN18-211	ENST00000481492	PAPPA	Q13219	1627 aa		27.78	■■■□□ 2.04
PTPN18-211	ENST00000481492	STK32B	Q9NY57	414 aa		27.77	■■■□□ 2.04
PTPN18-211	ENST00000481492	DDX10	Q13206	875 aa	Known RBP	27.76	■■■□□ 2.03
PTPN18-211	ENST00000481492	ITGB4	P16144	1822 aa		27.75	■■■□□ 2.03
PTPN18-211	ENST00000481492	LY75	O60449	1722 aa		27.75	■■■□□ 2.03
PTPN18-211	ENST00000481492	AKT1S1	Q96B36	256 aa		27.74	■■■□□ 2.03
PTPN18-211	ENST00000481492	KDM6A	O15550	1401 aa	Predicted RBP	27.73	■■■□□ 2.03
PTPN18-211	ENST00000481492	CCNL1	Q9UK58	526 aa	Predicted RBP	27.73	■■■□□ 2.03
PTPN18-211	ENST00000481492	U2SURP	O15042	1029 aa	Known RBP	27.72	■■■□□ 2.03
PTPN18-211	ENST00000481492	DCAF5	Q96JK2	942 aa		27.72	■■■□□ 2.03
PTPN18-211	ENST00000481492	ASAP1	Q9ULH1	1129 aa		27.72	■■■□□ 2.03
PTPN18-211	ENST00000481492	PALLD	Q8WX93	1383 aa		27.71	■■■□□ 2.03
PTPN18-211	ENST00000481492	ZEB1	P37275	1124 aa	Predicted RBP	27.71	■■■□□ 2.03
PTPN18-211	ENST00000481492	TMOD3	Q9NYL9	352 aa		27.71	■■■□□ 2.03
PTPN18-211	ENST00000481492	ERVV-2	B6SEH9	535 aa		27.7	■■■□□ 2.02
PTPN18-211	ENST00000481492	CASZ1	Q86V15	1759 aa		27.7	■■■□□ 2.02
PTPN18-211	ENST00000481492	HSP90AB1	P08238	724 aa	Known RBP	27.69	■■■□□ 2.02
PTPN18-211	ENST00000481492	MTHFSD	Q2M296	383 aa	Known RBP	27.69	■■■□□ 2.02
PTPN18-211	ENST00000481492	ATG3	Q9NT62	314 aa		27.69	■■■□□ 2.02
PTPN18-211	ENST00000481492	C1orf141	Q5JVX7	400 aa		27.67	■■■□□ 2.02
PTPN18-211	ENST00000481492	SMARCC1	Q92922	1105 aa	Predicted RBP	27.67	■■■□□ 2.02
PTPN18-211	ENST00000481492	CFAP53	Q96M91	514 aa		27.67	■■■□□ 2.02
PTPN18-211	ENST00000481492	ZBTB7A	O95365	584 aa		27.65	■■■□□ 2.02
PTPN18-211	ENST00000481492	AKAP4	Q5JQC9	854 aa		27.65	■■■□□ 2.02
PTPN18-211	ENST00000481492	LGR6	Q9HBX8	967 aa		27.65	■■■□□ 2.02
PTPN18-211	ENST00000481492	SPON1	Q9HCB6	807 aa		27.64	■■■□□ 2.02
PTPN18-211	ENST00000481492	CABP4	P57796	275 aa		27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	NFATC2IP	Q8NCF5	419 aa		27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	PHACTR3	Q96KR7	559 aa		27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	RSPH6A	Q9H0K4	717 aa		27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	PNPLA7	Q6ZV29	1317 aa		27.62	■■■□□ 2.01
PTPN18-211	ENST00000481492	LOC102724428	A0A0B4J2F2	783 aa		27.61	■■■□□ 2.01
PTPN18-211	ENST00000481492	SIK1	P57059	783 aa		27.61	■■■□□ 2.01
PTPN18-211	ENST00000481492	SLC4A9	Q96Q91	983 aa		27.61	■■■□□ 2.01
PTPN18-211	ENST00000481492	TFCP2L1	Q9NZI6	479 aa		27.6	■■■□□ 2.01
PTPN18-211	ENST00000481492	PTGER2	P43116	358 aa		27.6	■■■□□ 2.01
PTPN18-211	ENST00000481492	ITPK1	Q13572	414 aa		27.6	■■■□□ 2.01
PTPN18-211	ENST00000481492	RNMT	O43148	476 aa	Known RBP	27.59	■■■□□ 2.01
PTPN18-211	ENST00000481492	NUDC	Q9Y266	331 aa		27.59	■■■□□ 2.01
PTPN18-211	ENST00000481492	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.58	■■■□□ 2.01
PTPN18-211	ENST00000481492	PRKAR2B	P31323	418 aa		27.58	■■■□□ 2.01
PTPN18-211	ENST00000481492	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms