RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
RAPGEF1-207ENST00000481260 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-207ENST00000481260 R3HDM1Q15032 1099 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-207ENST00000481260 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-207ENST00000481260 NSD2O96028 1365 aa15.62■□□□□ 0.09
RAPGEF1-207ENST00000481260 NCAPD2Q15021 1401 aa15.62■□□□□ 0.09
RAPGEF1-207ENST00000481260 RREB1Q92766 1687 aa15.62■□□□□ 0.09
RAPGEF1-207ENST00000481260 NUP188Q5SRE5 1749 aa15.62■□□□□ 0.09
RAPGEF1-207ENST00000481260 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
RAPGEF1-207ENST00000481260 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
RAPGEF1-207ENST00000481260 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
RAPGEF1-207ENST00000481260 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
RAPGEF1-207ENST00000481260 CYP27B1O15528 508 aa15.59■□□□□ 0.09
RAPGEF1-207ENST00000481260 TATP17735 454 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF1-207ENST00000481260 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
RAPGEF1-207ENST00000481260 KCNQ4P56696 695 aa15.58■□□□□ 0.08
RAPGEF1-207ENST00000481260 PLSCR1O15162 318 aa15.57■□□□□ 0.08
RAPGEF1-207ENST00000481260 MTHFSP49914 203 aa15.57■□□□□ 0.08
RAPGEF1-207ENST00000481260 PDGFDQ9GZP0 370 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF1-207ENST00000481260 DOT1LQ8TEK3 1739 aa15.57■□□□□ 0.08
RAPGEF1-207ENST00000481260 IL13P35225 146 aa15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 TXNRD1Q16881 649 aa15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 SYTL4Q96C24 671 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 BTAF1O14981 1849 aa15.56■□□□□ 0.08
RAPGEF1-207ENST00000481260 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
RAPGEF1-207ENST00000481260 TOGARAM1Q9Y4F4 1720 aa15.54■□□□□ 0.08
RAPGEF1-207ENST00000481260 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
RAPGEF1-207ENST00000481260 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF1-207ENST00000481260 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.08
RAPGEF1-207ENST00000481260 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
RAPGEF1-207ENST00000481260 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
RAPGEF1-207ENST00000481260 KAT6BQ8WYB5 2073 aa15.52■□□□□ 0.08
RAPGEF1-207ENST00000481260 COL3A1P02461 1466 aaPredicted RBP15.52■□□□□ 0.07
RAPGEF1-207ENST00000481260 NPC1L1Q9UHC9 1359 aa15.51■□□□□ 0.07
RAPGEF1-207ENST00000481260 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
RAPGEF1-207ENST00000481260 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
RAPGEF1-207ENST00000481260 HMOX1P09601 288 aa15.49■□□□□ 0.07
RAPGEF1-207ENST00000481260 PHKG2P15735 406 aa15.49■□□□□ 0.07
RAPGEF1-207ENST00000481260 MPRIPQ6WCQ1 1025 aa15.49■□□□□ 0.07
RAPGEF1-207ENST00000481260 PAPPAQ13219 1627 aa15.49■□□□□ 0.07
RAPGEF1-207ENST00000481260 NKX1-1Q15270 411 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF1-207ENST00000481260 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
RAPGEF1-207ENST00000481260 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
RAPGEF1-207ENST00000481260 PIGBQ92521 554 aa15.47■□□□□ 0.07
RAPGEF1-207ENST00000481260 KDRP35968 1356 aa15.47■□□□□ 0.07
RAPGEF1-207ENST00000481260 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF1-207ENST00000481260 PPP2R1AP30153 589 aa15.46■□□□□ 0.07
RAPGEF1-207ENST00000481260 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
RAPGEF1-207ENST00000481260 SLC15A2Q16348 729 aa15.45■□□□□ 0.06
RAPGEF1-207ENST00000481260 ZNF530Q6P9A1 599 aaPredicted RBP15.45■□□□□ 0.06
RAPGEF1-207ENST00000481260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
RAPGEF1-207ENST00000481260 LRP5O75197 1615 aa15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 ITGB4P16144 1822 aa15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
RAPGEF1-207ENST00000481260 ZBTB7AO95365 584 aa15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 PLEKHO1Q53GL0 409 aaPredicted RBP15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 STK32BQ9NY57 414 aa15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 ASAP1Q9ULH1 1129 aa15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 LY75O60449 1722 aa15.43■□□□□ 0.06
RAPGEF1-207ENST00000481260 PALLDQ8WX93 1383 aa15.42■□□□□ 0.06
RAPGEF1-207ENST00000481260 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
RAPGEF1-207ENST00000481260 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
RAPGEF1-207ENST00000481260 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
RAPGEF1-207ENST00000481260 MTHFSDQ2M296 383 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-207ENST00000481260 LGR6Q9HBX8 967 aa15.4■□□□□ 0.06
RAPGEF1-207ENST00000481260 ATG3Q9NT62 314 aa15.4■□□□□ 0.06
RAPGEF1-207ENST00000481260 TMOD3Q9NYL9 352 aa15.4■□□□□ 0.06
RAPGEF1-207ENST00000481260 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF1-207ENST00000481260 SLC27A3Q5K4L6 730 aa15.39■□□□□ 0.05
RAPGEF1-207ENST00000481260 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
RAPGEF1-207ENST00000481260 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
RAPGEF1-207ENST00000481260 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
RAPGEF1-207ENST00000481260 ITPK1Q13572 414 aa15.38■□□□□ 0.05
RAPGEF1-207ENST00000481260 AMOTQ4VCS5 1084 aa15.38■□□□□ 0.05
RAPGEF1-207ENST00000481260 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
RAPGEF1-207ENST00000481260 PTGER2P43116 358 aa15.37■□□□□ 0.05
RAPGEF1-207ENST00000481260 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
RAPGEF1-207ENST00000481260 DCAF5Q96JK2 942 aa15.37■□□□□ 0.05
RAPGEF1-207ENST00000481260 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
RAPGEF1-207ENST00000481260 RSPH6AQ9H0K4 717 aa15.36■□□□□ 0.05
RAPGEF1-207ENST00000481260 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
RAPGEF1-207ENST00000481260 LOC102724428A0A0B4J2F2 783 aa15.35■□□□□ 0.05
RAPGEF1-207ENST00000481260 ERVV-2B6SEH9 535 aa15.35■□□□□ 0.05
RAPGEF1-207ENST00000481260 SIK1P57059 783 aa15.35■□□□□ 0.05
RAPGEF1-207ENST00000481260 NFATC2IPQ8NCF5 419 aa15.35■□□□□ 0.05
RAPGEF1-207ENST00000481260 TFCP2L1Q9NZI6 479 aa15.35■□□□□ 0.05
RAPGEF1-207ENST00000481260 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 CABP4P57796 275 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 SPON1Q9HCB6 807 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 C5P01031 1676 aa15.34■□□□□ 0.05
RAPGEF1-207ENST00000481260 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms