RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
ABCF3-215ENST00000481116 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
ABCF3-215ENST00000481116 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
ABCF3-215ENST00000481116 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
ABCF3-215ENST00000481116 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.41
ABCF3-215ENST00000481116 NSD2O96028 1365 aa17.64■□□□□ 0.41
ABCF3-215ENST00000481116 PLSCR1O15162 318 aa17.63■□□□□ 0.41
ABCF3-215ENST00000481116 RAPGEF4Q8WZA2 1011 aa17.63■□□□□ 0.41
ABCF3-215ENST00000481116 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-215ENST00000481116 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-215ENST00000481116 PROM2Q8N271 834 aa17.62■□□□□ 0.41
ABCF3-215ENST00000481116 EYA1Q99502 592 aa17.62■□□□□ 0.41
ABCF3-215ENST00000481116 PKD1L3Q7Z443 1732 aa17.61■□□□□ 0.41
ABCF3-215ENST00000481116 PER1O15534 1290 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-215ENST00000481116 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
ABCF3-215ENST00000481116 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-215ENST00000481116 ITGB4P16144 1822 aa17.59■□□□□ 0.41
ABCF3-215ENST00000481116 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
ABCF3-215ENST00000481116 CC2D1BQ5T0F9 858 aaKnown RBP17.59■□□□□ 0.41
ABCF3-215ENST00000481116 NBPF14Q5TI25 921 aa17.58■□□□□ 0.4
ABCF3-215ENST00000481116 SYTL4Q96C24 671 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-215ENST00000481116 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.4
ABCF3-215ENST00000481116 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
ABCF3-215ENST00000481116 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
ABCF3-215ENST00000481116 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-215ENST00000481116 LRP5O75197 1615 aa17.56■□□□□ 0.4
ABCF3-215ENST00000481116 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
ABCF3-215ENST00000481116 CYP27B1O15528 508 aa17.55■□□□□ 0.4
ABCF3-215ENST00000481116 LY75O60449 1722 aa17.55■□□□□ 0.4
ABCF3-215ENST00000481116 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
ABCF3-215ENST00000481116 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
ABCF3-215ENST00000481116 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
ABCF3-215ENST00000481116 CASZ1Q86V15 1759 aa17.52■□□□□ 0.4
ABCF3-215ENST00000481116 PAPPAQ13219 1627 aa17.51■□□□□ 0.39
ABCF3-215ENST00000481116 MTHFSP49914 203 aa17.51■□□□□ 0.39
ABCF3-215ENST00000481116 KCNQ4P56696 695 aa17.51■□□□□ 0.39
ABCF3-215ENST00000481116 LRRC4BQ9NT99 713 aa17.51■□□□□ 0.39
ABCF3-215ENST00000481116 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
ABCF3-215ENST00000481116 TUBGCP6Q96RT7 1819 aa17.5■□□□□ 0.39
ABCF3-215ENST00000481116 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
ABCF3-215ENST00000481116 PDGFDQ9GZP0 370 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-215ENST00000481116 IL13P35225 146 aa17.49■□□□□ 0.39
ABCF3-215ENST00000481116 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
ABCF3-215ENST00000481116 STK32BQ9NY57 414 aa17.48■□□□□ 0.39
ABCF3-215ENST00000481116 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
ABCF3-215ENST00000481116 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
ABCF3-215ENST00000481116 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
ABCF3-215ENST00000481116 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
ABCF3-215ENST00000481116 PHKG2P15735 406 aa17.46■□□□□ 0.39
ABCF3-215ENST00000481116 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-215ENST00000481116 ZNF827Q17R98 1081 aa17.46■□□□□ 0.39
ABCF3-215ENST00000481116 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
ABCF3-215ENST00000481116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.46■□□□□ 0.39
ABCF3-215ENST00000481116 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
ABCF3-215ENST00000481116 C5P01031 1676 aa17.44■□□□□ 0.38
ABCF3-215ENST00000481116 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
ABCF3-215ENST00000481116 HMOX1P09601 288 aa17.43■□□□□ 0.38
ABCF3-215ENST00000481116 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-215ENST00000481116 SLC27A3Q5K4L6 730 aa17.43■□□□□ 0.38
ABCF3-215ENST00000481116 PIGBQ92521 554 aa17.43■□□□□ 0.38
ABCF3-215ENST00000481116 ZBTB7AO95365 584 aa17.42■□□□□ 0.38
ABCF3-215ENST00000481116 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-215ENST00000481116 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-215ENST00000481116 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-215ENST00000481116 KDRP35968 1356 aa17.41■□□□□ 0.38
ABCF3-215ENST00000481116 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
ABCF3-215ENST00000481116 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
ABCF3-215ENST00000481116 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
ABCF3-215ENST00000481116 SPON1Q9HCB6 807 aa17.41■□□□□ 0.38
ABCF3-215ENST00000481116 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
ABCF3-215ENST00000481116 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-215ENST00000481116 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
ABCF3-215ENST00000481116 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
ABCF3-215ENST00000481116 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
ABCF3-215ENST00000481116 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
ABCF3-215ENST00000481116 ASAP1Q9ULH1 1129 aa17.38■□□□□ 0.37
ABCF3-215ENST00000481116 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
ABCF3-215ENST00000481116 C4BP0C0L5 1744 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 SMARCC1Q92922 1105 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-215ENST00000481116 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
ABCF3-215ENST00000481116 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
ABCF3-215ENST00000481116 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
ABCF3-215ENST00000481116 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-215ENST00000481116 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
ABCF3-215ENST00000481116 ERVV-2B6SEH9 535 aa17.34■□□□□ 0.37
ABCF3-215ENST00000481116 PTGER2P43116 358 aa17.34■□□□□ 0.37
ABCF3-215ENST00000481116 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
ABCF3-215ENST00000481116 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
ABCF3-215ENST00000481116 LOC102724428A0A0B4J2F2 783 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 SIK1P57059 783 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 CABP4P57796 275 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
ABCF3-215ENST00000481116 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
ABCF3-215ENST00000481116 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms