RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
NDC1-202ENST00000480952 MSL1Q68DK7 614 aa19■□□□□ 0.63
NDC1-202ENST00000480952 GPBP1L1Q9HC44 474 aaPredicted RBP19■□□□□ 0.63
NDC1-202ENST00000480952 CD163L1Q9NR16 1453 aa19■□□□□ 0.63
NDC1-202ENST00000480952 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
NDC1-202ENST00000480952 LTN1O94822 1766 aa18.99■□□□□ 0.63
NDC1-202ENST00000480952 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
NDC1-202ENST00000480952 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
NDC1-202ENST00000480952 NSD2O96028 1365 aa18.98■□□□□ 0.63
NDC1-202ENST00000480952 USP47Q96K76 1375 aa18.98■□□□□ 0.63
NDC1-202ENST00000480952 AMPHP49418 695 aa18.98■□□□□ 0.63
NDC1-202ENST00000480952 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
NDC1-202ENST00000480952 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
NDC1-202ENST00000480952 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
NDC1-202ENST00000480952 HOXC9P31274 260 aa18.96■□□□□ 0.63
NDC1-202ENST00000480952 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
NDC1-202ENST00000480952 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
NDC1-202ENST00000480952 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
NDC1-202ENST00000480952 COG3Q96JB2 828 aa18.95■□□□□ 0.62
NDC1-202ENST00000480952 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
NDC1-202ENST00000480952 HSPA6P17066 643 aa18.94■□□□□ 0.62
NDC1-202ENST00000480952 MAP3K19Q56UN5 1328 aa18.94■□□□□ 0.62
NDC1-202ENST00000480952 FLAD1Q8NFF5 587 aa18.93■□□□□ 0.62
NDC1-202ENST00000480952 FBLN1P23142 703 aa18.92■□□□□ 0.62
NDC1-202ENST00000480952 TUBGCP6Q96RT7 1819 aa18.92■□□□□ 0.62
NDC1-202ENST00000480952 RAPGEF4Q8WZA2 1011 aa18.91■□□□□ 0.62
NDC1-202ENST00000480952 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
NDC1-202ENST00000480952 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 LY75O60449 1722 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 DOT1LQ8TEK3 1739 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 MEGF6O75095 1541 aa18.9■□□□□ 0.62
NDC1-202ENST00000480952 USHBP1Q8N6Y0 703 aa18.88■□□□□ 0.61
NDC1-202ENST00000480952 WWC3Q9ULE0 1092 aa18.88■□□□□ 0.61
NDC1-202ENST00000480952 FAM208AQ9UK61 1670 aaKnown RBP18.88■□□□□ 0.61
NDC1-202ENST00000480952 ADCY9O60503 1353 aa18.87■□□□□ 0.61
NDC1-202ENST00000480952 TATP17735 454 aaPredicted RBP18.87■□□□□ 0.61
NDC1-202ENST00000480952 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
NDC1-202ENST00000480952 AK7Q96M32 723 aa18.87■□□□□ 0.61
NDC1-202ENST00000480952 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
NDC1-202ENST00000480952 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
NDC1-202ENST00000480952 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
NDC1-202ENST00000480952 PHF14O94880 888 aa18.84■□□□□ 0.61
NDC1-202ENST00000480952 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.61
NDC1-202ENST00000480952 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.61
NDC1-202ENST00000480952 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
NDC1-202ENST00000480952 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
NDC1-202ENST00000480952 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
NDC1-202ENST00000480952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
NDC1-202ENST00000480952 KIF3CO14782 793 aa18.81■□□□□ 0.6
NDC1-202ENST00000480952 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
NDC1-202ENST00000480952 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
NDC1-202ENST00000480952 GGNBP2Q9H3C7 697 aa18.8■□□□□ 0.6
NDC1-202ENST00000480952 HSP90AB2PQ58FF8 381 aa18.79■□□□□ 0.6
NDC1-202ENST00000480952 C5P01031 1676 aa18.79■□□□□ 0.6
NDC1-202ENST00000480952 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 FYB1O15117 783 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 CYP27B1O15528 508 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 SSFA2P28290 1259 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 APLP1P51693 650 aa18.78■□□□□ 0.6
NDC1-202ENST00000480952 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
NDC1-202ENST00000480952 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
NDC1-202ENST00000480952 PIGBQ92521 554 aa18.77■□□□□ 0.6
NDC1-202ENST00000480952 TESK2Q96S53 571 aa18.77■□□□□ 0.6
NDC1-202ENST00000480952 LOC102724428A0A0B4J2F2 783 aa18.75■□□□□ 0.59
NDC1-202ENST00000480952 SIK1P57059 783 aa18.75■□□□□ 0.59
NDC1-202ENST00000480952 INSRP06213 1382 aa18.75■□□□□ 0.59
NDC1-202ENST00000480952 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
NDC1-202ENST00000480952 TOMM70O94826 608 aa18.74■□□□□ 0.59
NDC1-202ENST00000480952 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
NDC1-202ENST00000480952 GNPATO15228 680 aa18.73■□□□□ 0.59
NDC1-202ENST00000480952 FLT4P35916 1363 aa18.72■□□□□ 0.59
NDC1-202ENST00000480952 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
NDC1-202ENST00000480952 MMP10P09238 476 aa18.72■□□□□ 0.59
NDC1-202ENST00000480952 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
NDC1-202ENST00000480952 SPG7Q9UQ90 795 aa18.72■□□□□ 0.59
NDC1-202ENST00000480952 BCS1LQ9Y276 419 aa18.72■□□□□ 0.59
NDC1-202ENST00000480952 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
NDC1-202ENST00000480952 DNAJC5GQ8N7S2 189 aa18.71■□□□□ 0.59
NDC1-202ENST00000480952 TMOD3Q9NYL9 352 aa18.71■□□□□ 0.59
NDC1-202ENST00000480952 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
NDC1-202ENST00000480952 TGFB2P61812 414 aa18.7■□□□□ 0.58
NDC1-202ENST00000480952 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
NDC1-202ENST00000480952 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
NDC1-202ENST00000480952 A0A0G2JLW4 131 aa18.69■□□□□ 0.58
NDC1-202ENST00000480952 ITPK1Q13572 414 aa18.69■□□□□ 0.58
NDC1-202ENST00000480952 ASAP1Q9ULH1 1129 aa18.69■□□□□ 0.58
NDC1-202ENST00000480952 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
NDC1-202ENST00000480952 TOGARAM1Q9Y4F4 1720 aa18.67■□□□□ 0.58
NDC1-202ENST00000480952 TMF1P82094 1093 aa18.67■□□□□ 0.58
NDC1-202ENST00000480952 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
NDC1-202ENST00000480952 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
NDC1-202ENST00000480952 NMRK2Q9NPI5 230 aa18.67■□□□□ 0.58
NDC1-202ENST00000480952 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
NDC1-202ENST00000480952 EMILIN1Q9Y6C2 1016 aa18.66■□□□□ 0.58
NDC1-202ENST00000480952 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
NDC1-202ENST00000480952 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
NDC1-202ENST00000480952 C16orf71Q8IYS4 520 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms