RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
TMEM40-207ENST00000480698 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
TMEM40-207ENST00000480698 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
TMEM40-207ENST00000480698 TTC21AQ8NDW8 1320 aa13.85□□□□□ -0.19
TMEM40-207ENST00000480698 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
TMEM40-207ENST00000480698 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
TMEM40-207ENST00000480698 LTN1O94822 1766 aa13.84□□□□□ -0.19
TMEM40-207ENST00000480698 HTRA3P83110 453 aa13.84□□□□□ -0.19
TMEM40-207ENST00000480698 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
TMEM40-207ENST00000480698 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
TMEM40-207ENST00000480698 FAM208AQ9UK61 1670 aaKnown RBP13.83□□□□□ -0.2
TMEM40-207ENST00000480698 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
TMEM40-207ENST00000480698 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
TMEM40-207ENST00000480698 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
TMEM40-207ENST00000480698 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
TMEM40-207ENST00000480698 UBR3Q6ZT12 1888 aa13.81□□□□□ -0.2
TMEM40-207ENST00000480698 FSTL1Q12841 308 aa13.81□□□□□ -0.2
TMEM40-207ENST00000480698 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
TMEM40-207ENST00000480698 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
TMEM40-207ENST00000480698 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
TMEM40-207ENST00000480698 BRCA1P38398 1863 aaKnown RBP13.79□□□□□ -0.2
TMEM40-207ENST00000480698 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
TMEM40-207ENST00000480698 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
TMEM40-207ENST00000480698 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
TMEM40-207ENST00000480698 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
TMEM40-207ENST00000480698 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
TMEM40-207ENST00000480698 WWC3Q9ULE0 1092 aa13.79□□□□□ -0.2
TMEM40-207ENST00000480698 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TMEM40-207ENST00000480698 SOX12O15370 315 aa13.77□□□□□ -0.21
TMEM40-207ENST00000480698 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
TMEM40-207ENST00000480698 ANKRD24Q8TF21 1146 aa13.77□□□□□ -0.21
TMEM40-207ENST00000480698 TNRC6CQ9HCJ0 1690 aaKnown RBP13.76□□□□□ -0.21
TMEM40-207ENST00000480698 MSH5O43196 834 aa13.76□□□□□ -0.21
TMEM40-207ENST00000480698 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
TMEM40-207ENST00000480698 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
TMEM40-207ENST00000480698 MEGF6O75095 1541 aa13.75□□□□□ -0.21
TMEM40-207ENST00000480698 USP47Q96K76 1375 aa13.75□□□□□ -0.21
TMEM40-207ENST00000480698 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
TMEM40-207ENST00000480698 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
TMEM40-207ENST00000480698 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
TMEM40-207ENST00000480698 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
TMEM40-207ENST00000480698 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
TMEM40-207ENST00000480698 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
TMEM40-207ENST00000480698 ARFGEF1Q9Y6D6 1849 aa13.73□□□□□ -0.21
TMEM40-207ENST00000480698 N4BP2Q86UW6 1770 aaPredicted RBP13.73□□□□□ -0.21
TMEM40-207ENST00000480698 SBNO2Q9Y2G9 1366 aa13.72□□□□□ -0.21
TMEM40-207ENST00000480698 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
TMEM40-207ENST00000480698 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
TMEM40-207ENST00000480698 HMGB2P26583 209 aaKnown RBP13.71□□□□□ -0.21
TMEM40-207ENST00000480698 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
TMEM40-207ENST00000480698 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.22
TMEM40-207ENST00000480698 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
TMEM40-207ENST00000480698 SSFA2P28290 1259 aa13.69□□□□□ -0.22
TMEM40-207ENST00000480698 TGFB2P61812 414 aa13.69□□□□□ -0.22
TMEM40-207ENST00000480698 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
TMEM40-207ENST00000480698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
TMEM40-207ENST00000480698 IP6K1Q92551 441 aa13.68□□□□□ -0.22
TMEM40-207ENST00000480698 NME9Q86XW9 330 aa13.67□□□□□ -0.22
TMEM40-207ENST00000480698 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
TMEM40-207ENST00000480698 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
TMEM40-207ENST00000480698 C9orf131Q5VYM1 1079 aa13.66□□□□□ -0.22
TMEM40-207ENST00000480698 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
TMEM40-207ENST00000480698 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 SBF1O95248 1867 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
TMEM40-207ENST00000480698 ITGB4P16144 1822 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 KCNA3P22001 575 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 BCS1LQ9Y276 419 aa13.65□□□□□ -0.22
TMEM40-207ENST00000480698 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
TMEM40-207ENST00000480698 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
TMEM40-207ENST00000480698 AK7Q96M32 723 aa13.64□□□□□ -0.23
TMEM40-207ENST00000480698 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
TMEM40-207ENST00000480698 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
TMEM40-207ENST00000480698 A0A0G2JLW4 131 aa13.62□□□□□ -0.23
TMEM40-207ENST00000480698 MMP10P09238 476 aa13.62□□□□□ -0.23
TMEM40-207ENST00000480698 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
TMEM40-207ENST00000480698 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
TMEM40-207ENST00000480698 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
TMEM40-207ENST00000480698 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
TMEM40-207ENST00000480698 PHF14O94880 888 aa13.61□□□□□ -0.23
TMEM40-207ENST00000480698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
TMEM40-207ENST00000480698 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
TMEM40-207ENST00000480698 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
TMEM40-207ENST00000480698 DPEP1P16444 411 aa13.6□□□□□ -0.23
TMEM40-207ENST00000480698 HOXC9P31274 260 aa13.6□□□□□ -0.23
TMEM40-207ENST00000480698 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
TMEM40-207ENST00000480698 FCHSD2O94868 740 aa13.59□□□□□ -0.23
TMEM40-207ENST00000480698 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
TMEM40-207ENST00000480698 RTL1A6NKG5 1358 aa13.58□□□□□ -0.23
TMEM40-207ENST00000480698 FOXN1O15353 648 aa13.58□□□□□ -0.24
TMEM40-207ENST00000480698 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
TMEM40-207ENST00000480698 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
TMEM40-207ENST00000480698 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
TMEM40-207ENST00000480698 CYP27B1O15528 508 aa13.57□□□□□ -0.24
TMEM40-207ENST00000480698 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
TMEM40-207ENST00000480698 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
TMEM40-207ENST00000480698 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
TMEM40-207ENST00000480698 RNF181Q9P0P0 153 aa13.57□□□□□ -0.24
TMEM40-207ENST00000480698 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms