RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
CCM2-213ENST00000480658 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
CCM2-213ENST00000480658 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
CCM2-213ENST00000480658 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
CCM2-213ENST00000480658 DOT1LQ8TEK3 1739 aa15.68■□□□□ 0.1
CCM2-213ENST00000480658 KCNQ2O43526 872 aa15.68■□□□□ 0.1
CCM2-213ENST00000480658 PPP1R1BQ9UD71 204 aaPredicted RBP15.68■□□□□ 0.1
CCM2-213ENST00000480658 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
CCM2-213ENST00000480658 CASZ1Q86V15 1759 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
CCM2-213ENST00000480658 SLC15A2Q16348 729 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCM2-213ENST00000480658 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 SHANK3Q9BYB0 1731 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 PAPPAQ13219 1627 aa15.67■□□□□ 0.1
CCM2-213ENST00000480658 PKD1L3Q7Z443 1732 aa15.66■□□□□ 0.1
CCM2-213ENST00000480658 FBLN1P23142 703 aa15.66■□□□□ 0.1
CCM2-213ENST00000480658 PROM2Q8N271 834 aa15.66■□□□□ 0.1
CCM2-213ENST00000480658 SYTL4Q96C24 671 aaPredicted RBP15.66■□□□□ 0.1
CCM2-213ENST00000480658 PANK3Q9H999 370 aa15.66■□□□□ 0.1
CCM2-213ENST00000480658 RGPD2P0DJD1 1756 aa15.66■□□□□ 0.1
CCM2-213ENST00000480658 PTF1AQ7RTS3 328 aa15.64■□□□□ 0.09
CCM2-213ENST00000480658 ANO8Q9HCE9 1232 aaPredicted RBP15.64■□□□□ 0.09
CCM2-213ENST00000480658 POLKQ9UBT6 870 aa15.64■□□□□ 0.09
CCM2-213ENST00000480658 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
CCM2-213ENST00000480658 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
CCM2-213ENST00000480658 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
CCM2-213ENST00000480658 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
CCM2-213ENST00000480658 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
CCM2-213ENST00000480658 LY75O60449 1722 aa15.63■□□□□ 0.09
CCM2-213ENST00000480658 USHBP1Q8N6Y0 703 aa15.62■□□□□ 0.09
CCM2-213ENST00000480658 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
CCM2-213ENST00000480658 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
CCM2-213ENST00000480658 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
CCM2-213ENST00000480658 KIF7Q2M1P5 1343 aa15.6■□□□□ 0.09
CCM2-213ENST00000480658 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
CCM2-213ENST00000480658 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
CCM2-213ENST00000480658 EYA1Q99502 592 aa15.59■□□□□ 0.09
CCM2-213ENST00000480658 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
CCM2-213ENST00000480658 IGSF1Q8N6C5 1336 aa15.59■□□□□ 0.09
CCM2-213ENST00000480658 TNNT2P45379 298 aaPredicted RBP15.58■□□□□ 0.08
CCM2-213ENST00000480658 EIF4A2Q14240 407 aaKnown RBP15.58■□□□□ 0.08
CCM2-213ENST00000480658 AMOTQ4VCS5 1084 aa15.58■□□□□ 0.08
CCM2-213ENST00000480658 FLAD1Q8NFF5 587 aa15.57■□□□□ 0.08
CCM2-213ENST00000480658 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
CCM2-213ENST00000480658 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
CCM2-213ENST00000480658 CYP27B1O15528 508 aa15.56■□□□□ 0.08
CCM2-213ENST00000480658 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
CCM2-213ENST00000480658 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
CCM2-213ENST00000480658 ZBTB7AO95365 584 aa15.55■□□□□ 0.08
CCM2-213ENST00000480658 POLD1P28340 1107 aa15.55■□□□□ 0.08
CCM2-213ENST00000480658 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
CCM2-213ENST00000480658 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
CCM2-213ENST00000480658 TMOD3Q9NYL9 352 aa15.55■□□□□ 0.08
CCM2-213ENST00000480658 C5P01031 1676 aa15.54■□□□□ 0.08
CCM2-213ENST00000480658 MAP3K5Q99683 1374 aa15.54■□□□□ 0.08
CCM2-213ENST00000480658 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
CCM2-213ENST00000480658 MPRIPQ6WCQ1 1025 aa15.54■□□□□ 0.08
CCM2-213ENST00000480658 PHKG2P15735 406 aa15.53■□□□□ 0.08
CCM2-213ENST00000480658 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
CCM2-213ENST00000480658 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
CCM2-213ENST00000480658 KDRP35968 1356 aa15.52■□□□□ 0.08
CCM2-213ENST00000480658 PTGER2P43116 358 aa15.52■□□□□ 0.08
CCM2-213ENST00000480658 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
CCM2-213ENST00000480658 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
CCM2-213ENST00000480658 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
CCM2-213ENST00000480658 C1orf141Q5JVX7 400 aa15.51■□□□□ 0.07
CCM2-213ENST00000480658 ARXQ96QS3 562 aa15.51■□□□□ 0.07
CCM2-213ENST00000480658 ITGB4P16144 1822 aa15.5■□□□□ 0.07
CCM2-213ENST00000480658 PNPLA7Q6ZV29 1317 aa15.5■□□□□ 0.07
CCM2-213ENST00000480658 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
CCM2-213ENST00000480658 ZNF831Q5JPB2 1677 aa15.5■□□□□ 0.07
CCM2-213ENST00000480658 AK7Q96M32 723 aa15.49■□□□□ 0.07
CCM2-213ENST00000480658 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
CCM2-213ENST00000480658 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
CCM2-213ENST00000480658 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
CCM2-213ENST00000480658 PIGBQ92521 554 aa15.48■□□□□ 0.07
CCM2-213ENST00000480658 PDGFDQ9GZP0 370 aaPredicted RBP15.48■□□□□ 0.07
CCM2-213ENST00000480658 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
CCM2-213ENST00000480658 ZNF530Q6P9A1 599 aaPredicted RBP15.47■□□□□ 0.07
CCM2-213ENST00000480658 TAF1LQ8IZX4 1826 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 LOC102724428A0A0B4J2F2 783 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 MSH5O43196 834 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 SSFA2P28290 1259 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 IL13P35225 146 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 MTHFSP49914 203 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 SIK1P57059 783 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
CCM2-213ENST00000480658 FHDC1Q9C0D6 1143 aaPredicted RBP15.46■□□□□ 0.07
CCM2-213ENST00000480658 TUBGCP6Q96RT7 1819 aa15.45■□□□□ 0.06
CCM2-213ENST00000480658 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
CCM2-213ENST00000480658 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
CCM2-213ENST00000480658 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
CCM2-213ENST00000480658 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
CCM2-213ENST00000480658 CABP4P57796 275 aa15.43■□□□□ 0.06
CCM2-213ENST00000480658 AKAP4Q5JQC9 854 aa15.43■□□□□ 0.06
CCM2-213ENST00000480658 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
CCM2-213ENST00000480658 ADRA2BP18089 450 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms