RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 USP4Q13107 963 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 EML3Q32P44 896 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 DEPDC4Q8N2C3 294 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
CALD1-219ENST00000480638 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
CALD1-219ENST00000480638 TSEN34Q9BSV6 310 aaKnown RBP10.52□□□□□ -0.73
CALD1-219ENST00000480638 TFIP11Q9UBB9 837 aaKnown RBP10.52□□□□□ -0.73
CALD1-219ENST00000480638 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
CALD1-219ENST00000480638 LZTS3O60299 673 aaPredicted RBP10.51□□□□□ -0.73
CALD1-219ENST00000480638 UPP2O95045 317 aa10.51□□□□□ -0.73
CALD1-219ENST00000480638 CYP2U1Q7Z449 544 aa10.51□□□□□ -0.73
CALD1-219ENST00000480638 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
CALD1-219ENST00000480638 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
CALD1-219ENST00000480638 MAFBQ9Y5Q3 323 aaPredicted RBP10.51□□□□□ -0.73
CALD1-219ENST00000480638 RELBQ01201 579 aa10.5□□□□□ -0.73
CALD1-219ENST00000480638 SCARF1Q14162 830 aa10.5□□□□□ -0.73
CALD1-219ENST00000480638 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
CALD1-219ENST00000480638 C1orf115Q9H7X2 142 aa10.5□□□□□ -0.73
CALD1-219ENST00000480638 GMPR2Q9P2T1 348 aaKnown RBP10.5□□□□□ -0.73
CALD1-219ENST00000480638 BMP2P12643 396 aa10.49□□□□□ -0.73
CALD1-219ENST00000480638 ZFP42Q96MM3 310 aa10.49□□□□□ -0.73
CALD1-219ENST00000480638 PTGIRP43119 386 aa10.48□□□□□ -0.73
CALD1-219ENST00000480638 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
CALD1-219ENST00000480638 SPINT1O43278 529 aa10.47□□□□□ -0.73
CALD1-219ENST00000480638 ZNF395Q9H8N7 513 aaPredicted RBP10.47□□□□□ -0.73
CALD1-219ENST00000480638 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
CALD1-219ENST00000480638 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
CALD1-219ENST00000480638 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
CALD1-219ENST00000480638 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.73
CALD1-219ENST00000480638 SERPINA10Q9UK55 444 aa10.46□□□□□ -0.73
CALD1-219ENST00000480638 POTECB2RU33 542 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 GNRH1P01148 92 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 LMOD1P29536 600 aaPredicted RBP10.45□□□□□ -0.74
CALD1-219ENST00000480638 GTF2IP78347 998 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 KIFC2Q96AC6 838 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
CALD1-219ENST00000480638 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
CALD1-219ENST00000480638 INSM2Q96T92 566 aaPredicted RBP10.44□□□□□ -0.74
CALD1-219ENST00000480638 RAB6BQ9NRW1 208 aa10.44□□□□□ -0.74
CALD1-219ENST00000480638 PCDHGA11Q9Y5H2 935 aa10.44□□□□□ -0.74
CALD1-219ENST00000480638 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
CALD1-219ENST00000480638 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
CALD1-219ENST00000480638 MKRN1Q9UHC7 482 aaKnown RBP10.43□□□□□ -0.74
CALD1-219ENST00000480638 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
CALD1-219ENST00000480638 STAU1O95793 577 aaKnown RBP10.42□□□□□ -0.74
CALD1-219ENST00000480638 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
CALD1-219ENST00000480638 ETNK1Q9HBU6 452 aa10.42□□□□□ -0.74
CALD1-219ENST00000480638 POLMQ9NP87 494 aaPredicted RBP10.42□□□□□ -0.74
CALD1-219ENST00000480638 TTLL8A6PVC2 850 aa10.41□□□□□ -0.74
CALD1-219ENST00000480638 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
CALD1-219ENST00000480638 MEN1O00255 615 aa10.41□□□□□ -0.74
CALD1-219ENST00000480638 SNRPBP14678 240 aaKnown RBP10.41□□□□□ -0.74
CALD1-219ENST00000480638 SCNN1DP51172 638 aa10.41□□□□□ -0.74
CALD1-219ENST00000480638 CLDN10P78369 228 aa10.41□□□□□ -0.74
CALD1-219ENST00000480638 CLN3Q13286 438 aa10.41□□□□□ -0.74
CALD1-219ENST00000480638 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
CALD1-219ENST00000480638 FOXD4L5Q5VV16 416 aaPredicted RBP10.41□□□□□ -0.74
CALD1-219ENST00000480638 IL2RAP01589 272 aa10.4□□□□□ -0.74
CALD1-219ENST00000480638 RFX1P22670 979 aa10.4□□□□□ -0.74
CALD1-219ENST00000480638 ATP1A2P50993 1020 aa10.4□□□□□ -0.74
CALD1-219ENST00000480638 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
CALD1-219ENST00000480638 GDF10P55107 478 aa10.39□□□□□ -0.75
CALD1-219ENST00000480638 PSME1Q06323 249 aa10.39□□□□□ -0.75
CALD1-219ENST00000480638 ESCO1Q5FWF5 840 aa10.39□□□□□ -0.75
CALD1-219ENST00000480638 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
CALD1-219ENST00000480638 TMEM229AB2RXF0 380 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 RNF217Q8TC41 542 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 CNKSR1Q969H4 720 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 NLRP3Q96P20 1036 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 DNAAF2Q9NVR5 837 aaKnown RBP10.38□□□□□ -0.75
CALD1-219ENST00000480638 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 HRH3Q9Y5N1 445 aa10.38□□□□□ -0.75
CALD1-219ENST00000480638 WASLO00401 505 aaPredicted RBP10.37□□□□□ -0.75
CALD1-219ENST00000480638 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
CALD1-219ENST00000480638 INHAP05111 366 aa10.37□□□□□ -0.75
CALD1-219ENST00000480638 RASA1P20936 1047 aa10.37□□□□□ -0.75
CALD1-219ENST00000480638 GPC1P35052 558 aa10.37□□□□□ -0.75
CALD1-219ENST00000480638 RNF144AP50876 292 aaPredicted RBP10.37□□□□□ -0.75
CALD1-219ENST00000480638 XAGE2Q96GT9 111 aa10.37□□□□□ -0.75
CALD1-219ENST00000480638 SOBPA7XYQ1 873 aa10.36□□□□□ -0.75
CALD1-219ENST00000480638 MAN1A2O60476 641 aa10.36□□□□□ -0.75
CALD1-219ENST00000480638 CRTC2Q53ET0 693 aaPredicted RBP10.36□□□□□ -0.75
CALD1-219ENST00000480638 SIX5Q8N196 739 aa10.36□□□□□ -0.75
CALD1-219ENST00000480638 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
CALD1-219ENST00000480638 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
CALD1-219ENST00000480638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.35□□□□□ -0.75
CALD1-219ENST00000480638 FAM196BA6NMK8 535 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L21D6R901 530 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms