RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
SIK3-210ENST00000480468 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
SIK3-210ENST00000480468 VAMP4O75379 141 aa12.87□□□□□ -0.35
SIK3-210ENST00000480468 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
SIK3-210ENST00000480468 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
SIK3-210ENST00000480468 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
SIK3-210ENST00000480468 KNDC1Q76NI1 1749 aa12.87□□□□□ -0.35
SIK3-210ENST00000480468 GOLGA6L6A8MZA4 724 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
SIK3-210ENST00000480468 MX1P20591 662 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 NCBP1Q09161 790 aaKnown RBP12.86□□□□□ -0.35
SIK3-210ENST00000480468 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
SIK3-210ENST00000480468 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
SIK3-210ENST00000480468 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 PLCH2O75038 1416 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
SIK3-210ENST00000480468 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
SIK3-210ENST00000480468 ANAPC15P60006 121 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 KCNF1Q9H3M0 494 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 FANCAO15360 1455 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 NEK4P51957 841 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
SIK3-210ENST00000480468 PNPLA6Q8IY17 1366 aa12.84□□□□□ -0.35
SIK3-210ENST00000480468 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
SIK3-210ENST00000480468 FOXD4L4Q8WXT5 416 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
SIK3-210ENST00000480468 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 MROH2AA6NES4 1674 aa12.84□□□□□ -0.35
SIK3-210ENST00000480468 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 MPNDQ8N594 471 aa12.84□□□□□ -0.35
SIK3-210ENST00000480468 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
SIK3-210ENST00000480468 RGS12O14924 1447 aa12.83□□□□□ -0.36
SIK3-210ENST00000480468 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
SIK3-210ENST00000480468 FCHSD2O94868 740 aa12.83□□□□□ -0.36
SIK3-210ENST00000480468 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
SIK3-210ENST00000480468 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
SIK3-210ENST00000480468 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
SIK3-210ENST00000480468 ADGRB3O60242 1522 aa12.83□□□□□ -0.36
SIK3-210ENST00000480468 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
SIK3-210ENST00000480468 PDIA4P13667 645 aaKnown RBP12.82□□□□□ -0.36
SIK3-210ENST00000480468 UBE2HP62256 183 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 TERF2Q15554 542 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 IGSF3O75054 1194 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 MCCP23508 829 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
SIK3-210ENST00000480468 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
SIK3-210ENST00000480468 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
SIK3-210ENST00000480468 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 PAXBP1Q9Y5B6 917 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 SSH2Q76I76 1423 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
SIK3-210ENST00000480468 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
SIK3-210ENST00000480468 GNAI1P63096 354 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
SIK3-210ENST00000480468 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
SIK3-210ENST00000480468 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
SIK3-210ENST00000480468 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 KRT222Q8N1A0 295 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
SIK3-210ENST00000480468 FAM53CQ9NYF3 392 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 ZFYVE9O95405 1425 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
SIK3-210ENST00000480468 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
SIK3-210ENST00000480468 PPLO60437 1756 aa12.79□□□□□ -0.36
SIK3-210ENST00000480468 KCNJ4P48050 445 aa12.79□□□□□ -0.36
SIK3-210ENST00000480468 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
SIK3-210ENST00000480468 TCHHQ07283 1943 aa12.79□□□□□ -0.36
SIK3-210ENST00000480468 TULP2O00295 520 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 AP5Z1O43299 807 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 SRCIN1Q9C0H9 1055 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 TSPYL1Q9H0U9 437 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 GLI2P10070 1586 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
SIK3-210ENST00000480468 A0A1W2PP64 1363 aa12.77□□□□□ -0.36
SIK3-210ENST00000480468 NFE2L2Q16236 605 aa12.77□□□□□ -0.36
SIK3-210ENST00000480468 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.36
SIK3-210ENST00000480468 ESYT1Q9BSJ8 1104 aa12.77□□□□□ -0.36
SIK3-210ENST00000480468 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms