RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
SFXN2-203ENST00000480358 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
SFXN2-203ENST00000480358 USP21Q9UK80 565 aa18.36■□□□□ 0.53
SFXN2-203ENST00000480358 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
SFXN2-203ENST00000480358 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
SFXN2-203ENST00000480358 IL2RBP14784 551 aa18.35■□□□□ 0.53
SFXN2-203ENST00000480358 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
SFXN2-203ENST00000480358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN2-203ENST00000480358 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 AFF2P51816 1311 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 SPATA31A5Q5VU36 1347 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 SPATA31A7Q8IWB4 1347 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 VPS72Q15906 364 aa18.34■□□□□ 0.53
SFXN2-203ENST00000480358 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
SFXN2-203ENST00000480358 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.52
SFXN2-203ENST00000480358 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.52
SFXN2-203ENST00000480358 SPG7Q9UQ90 795 aa18.32■□□□□ 0.52
SFXN2-203ENST00000480358 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
SFXN2-203ENST00000480358 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
SFXN2-203ENST00000480358 DISP2A7MBM2 1401 aa18.31■□□□□ 0.52
SFXN2-203ENST00000480358 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
SFXN2-203ENST00000480358 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
SFXN2-203ENST00000480358 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
SFXN2-203ENST00000480358 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
SFXN2-203ENST00000480358 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
SFXN2-203ENST00000480358 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
SFXN2-203ENST00000480358 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
SFXN2-203ENST00000480358 AKAP4Q5JQC9 854 aa18.29■□□□□ 0.52
SFXN2-203ENST00000480358 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
SFXN2-203ENST00000480358 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
SFXN2-203ENST00000480358 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
SFXN2-203ENST00000480358 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
SFXN2-203ENST00000480358 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
SFXN2-203ENST00000480358 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
SFXN2-203ENST00000480358 ATRNO75882 1429 aa18.27■□□□□ 0.52
SFXN2-203ENST00000480358 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
SFXN2-203ENST00000480358 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
SFXN2-203ENST00000480358 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
SFXN2-203ENST00000480358 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 MCM10Q7L590 875 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 IL16Q14005 1332 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 SHANK3Q9BYB0 1731 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 PHKG2P15735 406 aa18.26■□□□□ 0.51
SFXN2-203ENST00000480358 E9PSI1 815 aa18.25■□□□□ 0.51
SFXN2-203ENST00000480358 CYP27B1O15528 508 aa18.25■□□□□ 0.51
SFXN2-203ENST00000480358 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
SFXN2-203ENST00000480358 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
SFXN2-203ENST00000480358 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
SFXN2-203ENST00000480358 EXOC5O00471 708 aa18.23■□□□□ 0.51
SFXN2-203ENST00000480358 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 ZNF772Q68DY9 489 aaPredicted RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
SFXN2-203ENST00000480358 QTRT2Q9H974 415 aaKnown RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 GLI3P10071 1580 aa18.23■□□□□ 0.51
SFXN2-203ENST00000480358 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 TNS2Q63HR2 1409 aa18.23■□□□□ 0.51
SFXN2-203ENST00000480358 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
SFXN2-203ENST00000480358 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
SFXN2-203ENST00000480358 CEMIPQ8WUJ3 1361 aa18.22■□□□□ 0.51
SFXN2-203ENST00000480358 MPRIPQ6WCQ1 1025 aa18.22■□□□□ 0.51
SFXN2-203ENST00000480358 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
SFXN2-203ENST00000480358 DDB1Q16531 1140 aa18.22■□□□□ 0.51
SFXN2-203ENST00000480358 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
SFXN2-203ENST00000480358 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
SFXN2-203ENST00000480358 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
SFXN2-203ENST00000480358 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
SFXN2-203ENST00000480358 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
SFXN2-203ENST00000480358 LGR6Q9HBX8 967 aa18.21■□□□□ 0.51
SFXN2-203ENST00000480358 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
SFXN2-203ENST00000480358 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
SFXN2-203ENST00000480358 DUSP27Q5VZP5 1158 aa18.2■□□□□ 0.5
SFXN2-203ENST00000480358 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
SFXN2-203ENST00000480358 GNAI1P63096 354 aa18.2■□□□□ 0.5
SFXN2-203ENST00000480358 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
SFXN2-203ENST00000480358 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
SFXN2-203ENST00000480358 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
SFXN2-203ENST00000480358 ZNF853P0CG23 659 aa18.18■□□□□ 0.5
SFXN2-203ENST00000480358 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
SFXN2-203ENST00000480358 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
SFXN2-203ENST00000480358 TEFQ10587 303 aa18.17■□□□□ 0.5
SFXN2-203ENST00000480358 A0A0G2JS52 829 aa18.17■□□□□ 0.5
SFXN2-203ENST00000480358 MYT1Q01538 1121 aa18.17■□□□□ 0.5
SFXN2-203ENST00000480358 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
SFXN2-203ENST00000480358 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
SFXN2-203ENST00000480358 CHL1O00533 1208 aa18.16■□□□□ 0.5
SFXN2-203ENST00000480358 ILDR1Q86SU0 546 aaPredicted RBP18.16■□□□□ 0.5
SFXN2-203ENST00000480358 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
SFXN2-203ENST00000480358 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
SFXN2-203ENST00000480358 BABAM1Q9NWV8 329 aa18.15■□□□□ 0.5
SFXN2-203ENST00000480358 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
SFXN2-203ENST00000480358 MRC1P22897 1456 aa18.15■□□□□ 0.5
SFXN2-203ENST00000480358 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
SFXN2-203ENST00000480358 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
SFXN2-203ENST00000480358 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
SFXN2-203ENST00000480358 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms