RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 FLT4P35916 1363 aa21.46■■□□□ 1.03
PKD1-213ENST00000480227 SBNO1A3KN83 1393 aa21.45■■□□□ 1.02
PKD1-213ENST00000480227 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
PKD1-213ENST00000480227 RGS12O14924 1447 aa21.45■■□□□ 1.02
PKD1-213ENST00000480227 AMPHP49418 695 aa21.45■■□□□ 1.02
PKD1-213ENST00000480227 CRB1P82279 1406 aa21.45■■□□□ 1.02
PKD1-213ENST00000480227 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
PKD1-213ENST00000480227 CEP170BQ9Y4F5 1589 aaPredicted RBP21.44■■□□□ 1.02
PKD1-213ENST00000480227 NLRP6P59044 892 aa21.44■■□□□ 1.02
PKD1-213ENST00000480227 EYA1Q99502 592 aa21.44■■□□□ 1.02
PKD1-213ENST00000480227 BMP2KLQ5H9B9 411 aa21.43■■□□□ 1.02
PKD1-213ENST00000480227 KIAA0232Q92628 1395 aa21.42■■□□□ 1.02
PKD1-213ENST00000480227 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
PKD1-213ENST00000480227 RTF1Q92541 710 aaKnown RBP21.4■■□□□ 1.02
PKD1-213ENST00000480227 KDRP35968 1356 aa21.4■■□□□ 1.02
PKD1-213ENST00000480227 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
PKD1-213ENST00000480227 MSH6P52701 1360 aa21.4■■□□□ 1.02
PKD1-213ENST00000480227 SLC4A2P04920 1241 aa21.39■■□□□ 1.02
PKD1-213ENST00000480227 TSPYL4Q9UJ04 414 aa21.39■■□□□ 1.02
PKD1-213ENST00000480227 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.01
PKD1-213ENST00000480227 KIF24Q5T7B8 1368 aa21.39■■□□□ 1.01
PKD1-213ENST00000480227 MARF1Q9Y4F3 1742 aaKnown RBP21.38■■□□□ 1.01
PKD1-213ENST00000480227 BRPF3Q9ULD4 1205 aa21.38■■□□□ 1.01
PKD1-213ENST00000480227 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
PKD1-213ENST00000480227 HSCBQ8IWL3 235 aa21.37■■□□□ 1.01
PKD1-213ENST00000480227 ATP10DQ9P241 1426 aa21.37■■□□□ 1.01
PKD1-213ENST00000480227 RBM25P49756 843 aaKnown RBP21.36■■□□□ 1.01
PKD1-213ENST00000480227 G2E3Q7L622 706 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 ABTB2Q8N961 1025 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 MEIS3Q99687 375 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
PKD1-213ENST00000480227 HOXC9P31274 260 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 LTV1Q96GA3 475 aaPredicted RBP21.36■■□□□ 1.01
PKD1-213ENST00000480227 DCTPP1Q9H773 170 aa21.36■■□□□ 1.01
PKD1-213ENST00000480227 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
PKD1-213ENST00000480227 PTPRCP08575 1304 aa21.35■■□□□ 1.01
PKD1-213ENST00000480227 ANKARQ7Z5J8 1434 aa21.35■■□□□ 1.01
PKD1-213ENST00000480227 F6X3S4 739 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 CEP85Q6P2H3 762 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 C14orf37Q86TY3 774 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
PKD1-213ENST00000480227 ANKRD44Q8N8A2 993 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
PKD1-213ENST00000480227 GSPT1P15170 499 aaKnown RBP21.33■■□□□ 1.01
PKD1-213ENST00000480227 SLC4A10Q6U841 1118 aa21.33■■□□□ 1
PKD1-213ENST00000480227 PLEKHM2Q8IWE5 1019 aa21.33■■□□□ 1
PKD1-213ENST00000480227 APBB1O00213 710 aa21.32■■□□□ 1
PKD1-213ENST00000480227 OTUD7AQ8TE49 926 aaPredicted RBP21.31■■□□□ 1
PKD1-213ENST00000480227 CHMP5Q9NZZ3 219 aa21.31■■□□□ 1
PKD1-213ENST00000480227 NWD1Q149M9 1564 aa21.3■■□□□ 1
PKD1-213ENST00000480227 USHBP1Q8N6Y0 703 aa21.3■■□□□ 1
PKD1-213ENST00000480227 SMARCA5O60264 1052 aaPredicted RBP21.3■■□□□ 1
PKD1-213ENST00000480227 RPAP2Q8IXW5 612 aaPredicted RBP21.3■■□□□ 1
PKD1-213ENST00000480227 NECTIN2Q92692 538 aa21.3■■□□□ 1
PKD1-213ENST00000480227 KIF2CQ99661 725 aa21.3■■□□□ 1
PKD1-213ENST00000480227 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
PKD1-213ENST00000480227 LTN1O94822 1766 aa21.27■■□□□ 1
PKD1-213ENST00000480227 LRRC37A3O60309 1634 aa21.27■■□□□ 1
PKD1-213ENST00000480227 CDC45O75419 566 aa21.27■■□□□ 1
PKD1-213ENST00000480227 MCM4P33991 863 aa21.27■■□□□ 1
PKD1-213ENST00000480227 IL17REQ8NFR9 667 aa21.27■■□□□ 1
PKD1-213ENST00000480227 PHF8Q9UPP1 1060 aa21.27■■□□□ 1
PKD1-213ENST00000480227 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
PKD1-213ENST00000480227 SNX21Q969T3 373 aa21.26■□□□□ 0.99
PKD1-213ENST00000480227 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
PKD1-213ENST00000480227 TTC22Q5TAA0 569 aa21.25■□□□□ 0.99
PKD1-213ENST00000480227 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
PKD1-213ENST00000480227 CD2BP2O95400 341 aaKnown RBP21.25■□□□□ 0.99
PKD1-213ENST00000480227 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
PKD1-213ENST00000480227 STK31Q9BXU1 1019 aa21.25■□□□□ 0.99
PKD1-213ENST00000480227 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
PKD1-213ENST00000480227 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
PKD1-213ENST00000480227 MAP3K5Q99683 1374 aa21.24■□□□□ 0.99
PKD1-213ENST00000480227 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
PKD1-213ENST00000480227 CCT4P50991 539 aaKnown RBP21.23■□□□□ 0.99
PKD1-213ENST00000480227 FLIIQ13045 1269 aa21.23■□□□□ 0.99
PKD1-213ENST00000480227 ZBTB7CA1YPR0 619 aa21.22■□□□□ 0.99
PKD1-213ENST00000480227 FKBP5Q13451 457 aaPredicted RBP21.22■□□□□ 0.99
PKD1-213ENST00000480227 FOXD4L1Q9NU39 408 aa21.22■□□□□ 0.99
PKD1-213ENST00000480227 NCOA3Q9Y6Q9 1424 aa21.22■□□□□ 0.99
PKD1-213ENST00000480227 GZF1Q9H116 711 aaPredicted RBP21.22■□□□□ 0.99
PKD1-213ENST00000480227 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
PKD1-213ENST00000480227 HSP90AA1P07900 732 aaKnown RBP21.21■□□□□ 0.99
PKD1-213ENST00000480227 ESCO1Q5FWF5 840 aa21.21■□□□□ 0.99
PKD1-213ENST00000480227 CCDC30Q5VVM6 783 aa21.21■□□□□ 0.99
PKD1-213ENST00000480227 ARXQ96QS3 562 aa21.21■□□□□ 0.99
PKD1-213ENST00000480227 CACNA1FO60840 1977 aa21.2■□□□□ 0.98
PKD1-213ENST00000480227 DDIT3P35638 169 aa21.2■□□□□ 0.98
PKD1-213ENST00000480227 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
PKD1-213ENST00000480227 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
PKD1-213ENST00000480227 SDSP20132 328 aa21.19■□□□□ 0.98
PKD1-213ENST00000480227 PSME1Q06323 249 aa21.18■□□□□ 0.98
PKD1-213ENST00000480227 NBPF6Q5VWK0 638 aa21.18■□□□□ 0.98
PKD1-213ENST00000480227 NBPF4Q96M43 638 aa21.18■□□□□ 0.98
PKD1-213ENST00000480227 HMMRO75330 724 aa21.18■□□□□ 0.98
PKD1-213ENST00000480227 GNAI2P04899 355 aa21.17■□□□□ 0.98
PKD1-213ENST00000480227 IP6K1Q92551 441 aa21.17■□□□□ 0.98
PKD1-213ENST00000480227 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms