RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 SPATA31A5Q5VU36 1347 aa11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 SPATA31A7Q8IWB4 1347 aa11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 APAF1O14727 1248 aa11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 EVA1CP58658 441 aa11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 RRP7AQ9Y3A4 280 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-208ENST00000480209 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 USP21Q9UK80 565 aa11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
NUDCD3-208ENST00000480209 VPS72Q15906 364 aa11.88□□□□□ -0.51
NUDCD3-208ENST00000480209 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-208ENST00000480209 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
NUDCD3-208ENST00000480209 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
NUDCD3-208ENST00000480209 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-208ENST00000480209 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-208ENST00000480209 ITGB4P16144 1822 aa11.87□□□□□ -0.51
NUDCD3-208ENST00000480209 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
NUDCD3-208ENST00000480209 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-208ENST00000480209 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
NUDCD3-208ENST00000480209 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-208ENST00000480209 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
NUDCD3-208ENST00000480209 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 MRC1P22897 1456 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 IL2RBP14784 551 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 RAPGEF4Q8WZA2 1011 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
NUDCD3-208ENST00000480209 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 CCDC9Q9Y3X0 531 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
NUDCD3-208ENST00000480209 SBF2Q86WG5 1849 aa11.83□□□□□ -0.51
NUDCD3-208ENST00000480209 CYP27B1O15528 508 aa11.83□□□□□ -0.52
NUDCD3-208ENST00000480209 BARGINQ6ZT62 677 aa11.83□□□□□ -0.52
NUDCD3-208ENST00000480209 RIPK4P57078 832 aa11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 GJD4Q96KN9 370 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 THRAP3Q9Y2W1 955 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-208ENST00000480209 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
NUDCD3-208ENST00000480209 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-208ENST00000480209 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
NUDCD3-208ENST00000480209 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
NUDCD3-208ENST00000480209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.522e-10■■□□□ 14.1
NUDCD3-208ENST00000480209 CEMIPQ8WUJ3 1361 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 UBR2Q8IWV8 1755 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 NEFMP07197 916 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 PHKG2P15735 406 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 MCM10Q7L590 875 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 QTRT2Q9H974 415 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
NUDCD3-208ENST00000480209 RGS12O14924 1447 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 NHSQ6T4R5 1651 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 AMOTQ4VCS5 1084 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 POTEAQ6S8J7 498 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
NUDCD3-208ENST00000480209 C5P01031 1676 aa11.78□□□□□ -0.52
NUDCD3-208ENST00000480209 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
NUDCD3-208ENST00000480209 ZNF772Q68DY9 489 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-208ENST00000480209 IL17REQ8NFR9 667 aa11.78□□□□□ -0.52
NUDCD3-208ENST00000480209 KAT6BQ8WYB5 2073 aa11.78□□□□□ -0.52
NUDCD3-208ENST00000480209 BTAF1O14981 1849 aa11.77□□□□□ -0.52
NUDCD3-208ENST00000480209 C1orf141Q5JVX7 400 aa11.77□□□□□ -0.53
NUDCD3-208ENST00000480209 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
NUDCD3-208ENST00000480209 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
NUDCD3-208ENST00000480209 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
NUDCD3-208ENST00000480209 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
NUDCD3-208ENST00000480209 ZBTB22O15209 634 aa11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 DDX54Q8TDD1 881 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-208ENST00000480209 HTATSF1O43719 755 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-208ENST00000480209 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
NUDCD3-208ENST00000480209 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-208ENST00000480209 DDB1Q16531 1140 aa11.75□□□□□ -0.53
NUDCD3-208ENST00000480209 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
NUDCD3-208ENST00000480209 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 A0A0G2JS52 829 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 EXOC5O00471 708 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 RBM6P78332 1123 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 MYT1Q01538 1121 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms