RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 MAPK8IP3Q9UPT6 1336 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 AFF2P51816 1311 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 NEFMP07197 916 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 TCP11L2Q8N4U5 519 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 RUNDC1Q96C34 613 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 PLEKHF1Q96S99 279 aa8.5□□□□□ -1.05
HERC4-210ENST00000480158 UNC5CLQ8IV45 518 aa8.49□□□□□ -1.05
HERC4-210ENST00000480158 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
HERC4-210ENST00000480158 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
HERC4-210ENST00000480158 LMO7Q8WWI1 1683 aa8.49□□□□□ -1.05
HERC4-210ENST00000480158 COL14A1Q05707 1796 aaKnown RBP8.49□□□□□ -1.05
HERC4-210ENST00000480158 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
HERC4-210ENST00000480158 FNBP4Q8N3X1 1017 aaPredicted RBP8.49□□□□□ -1.05
HERC4-210ENST00000480158 A0A0G2JS52 829 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 MYT1Q01538 1121 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 BCL9LQ86UU0 1499 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 CRB1P82279 1406 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 MTHFSDQ2M296 383 aaKnown RBP8.48□□□□□ -1.05
HERC4-210ENST00000480158 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
HERC4-210ENST00000480158 SLIT2O94813 1529 aa8.48□□□□□ -1.05
HERC4-210ENST00000480158 PLCH1Q4KWH8 1693 aa8.47□□□□□ -1.05
HERC4-210ENST00000480158 RIPK4P57078 832 aa8.47□□□□□ -1.05
HERC4-210ENST00000480158 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
HERC4-210ENST00000480158 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.05
HERC4-210ENST00000480158 QTRT2Q9H974 415 aaKnown RBP8.46□□□□□ -1.05
HERC4-210ENST00000480158 KDRP35968 1356 aa8.46□□□□□ -1.05
HERC4-210ENST00000480158 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.06
HERC4-210ENST00000480158 IL2RBP14784 551 aa8.46□□□□□ -1.06
HERC4-210ENST00000480158 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.06
HERC4-210ENST00000480158 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
HERC4-210ENST00000480158 DDX54Q8TDD1 881 aaKnown RBP8.46□□□□□ -1.06
HERC4-210ENST00000480158 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
HERC4-210ENST00000480158 SPATA31A1Q5TZJ5 1347 aa8.46□□□□□ -1.06
HERC4-210ENST00000480158 ABCC6O95255 1503 aa8.46□□□□□ -1.06
HERC4-210ENST00000480158 SPATA31A5Q5VU36 1347 aa8.45□□□□□ -1.06
HERC4-210ENST00000480158 SPATA31A7Q8IWB4 1347 aa8.45□□□□□ -1.06
HERC4-210ENST00000480158 MEGF6O75095 1541 aa8.45□□□□□ -1.06
HERC4-210ENST00000480158 VPS72Q15906 364 aa8.45□□□□□ -1.06
HERC4-210ENST00000480158 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
HERC4-210ENST00000480158 PLEKHO1Q53GL0 409 aaPredicted RBP8.45□□□□□ -1.06
HERC4-210ENST00000480158 ZNF530Q6P9A1 599 aaPredicted RBP8.45□□□□□ -1.06
HERC4-210ENST00000480158 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
HERC4-210ENST00000480158 MCM10Q7L590 875 aa8.44□□□□□ -1.06
HERC4-210ENST00000480158 TRPC5Q9UL62 973 aaPredicted RBP8.44□□□□□ -1.06
HERC4-210ENST00000480158 MPRIPQ6WCQ1 1025 aa8.44□□□□□ -1.06
HERC4-210ENST00000480158 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
HERC4-210ENST00000480158 GJD4Q96KN9 370 aaPredicted RBP8.44□□□□□ -1.06
HERC4-210ENST00000480158 C1orf141Q5JVX7 400 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 BBXQ8WY36 941 aaPredicted RBP8.43□□□□□ -1.06
HERC4-210ENST00000480158 TRIM35Q9UPQ4 493 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
HERC4-210ENST00000480158 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 FAM208AQ9UK61 1670 aaKnown RBP8.43□□□□□ -1.06
HERC4-210ENST00000480158 EXOC5O00471 708 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 AMOTQ4VCS5 1084 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 FAM182BQ5T319 152 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 WWC1Q8IX03 1113 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
HERC4-210ENST00000480158 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
HERC4-210ENST00000480158 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
HERC4-210ENST00000480158 GNAT3A8MTJ3 354 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 CYP27B1O15528 508 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 DDB1Q16531 1140 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 NWD2Q9ULI1 1742 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
HERC4-210ENST00000480158 ZNF772Q68DY9 489 aaPredicted RBP8.42□□□□□ -1.06
HERC4-210ENST00000480158 RGS17Q9UGC6 210 aaPredicted RBP8.42□□□□□ -1.06
HERC4-210ENST00000480158 THRAP3Q9Y2W1 955 aaKnown RBP8.42□□□□□ -1.06
HERC4-210ENST00000480158 MIS18AQ9NYP9 233 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 OVOS2A0A0G2JMS6 1433 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 ZBED9Q6R2W3 1325 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 PHKG2P15735 406 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 IFNL2Q8IZJ0 200 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
HERC4-210ENST00000480158 SPINK5Q9NQ38 1064 aaPredicted RBP8.41□□□□□ -1.06
HERC4-210ENST00000480158 ATRNO75882 1429 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 AKAP4Q5JQC9 854 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 PCDH11XQ9BZA7 1347 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.06
HERC4-210ENST00000480158 PDE3BQ13370 1112 aa8.4□□□□□ -1.07
HERC4-210ENST00000480158 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.07
HERC4-210ENST00000480158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.074e-9■■□□□ 14.2
HERC4-210ENST00000480158 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
HERC4-210ENST00000480158 RXRBP28702 533 aa8.39□□□□□ -1.07
HERC4-210ENST00000480158 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
HERC4-210ENST00000480158 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
HERC4-210ENST00000480158 TSR2Q969E8 191 aaKnown RBP8.39□□□□□ -1.07
HERC4-210ENST00000480158 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
HERC4-210ENST00000480158 EP400Q96L91 3159 aa8.39□□□□□ -1.07
HERC4-210ENST00000480158 RBM6P78332 1123 aaKnown RBP8.39□□□□□ -1.07
HERC4-210ENST00000480158 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
HERC4-210ENST00000480158 ACSBG1Q96GR2 724 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms