RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
USP11-208ENST00000480104 C10orf71Q711Q0 1435 aa17.63■□□□□ 0.41
USP11-208ENST00000480104 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
USP11-208ENST00000480104 PPARGC1BQ86YN6 1023 aaKnown RBP17.62■□□□□ 0.41
USP11-208ENST00000480104 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
USP11-208ENST00000480104 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
USP11-208ENST00000480104 ERBB3P21860 1342 aa17.62■□□□□ 0.41
USP11-208ENST00000480104 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
USP11-208ENST00000480104 SRPK2P78362 688 aaKnown RBP17.61■□□□□ 0.41
USP11-208ENST00000480104 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
USP11-208ENST00000480104 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
USP11-208ENST00000480104 FLAD1Q8NFF5 587 aa17.6■□□□□ 0.41
USP11-208ENST00000480104 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
USP11-208ENST00000480104 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
USP11-208ENST00000480104 C9orf131Q5VYM1 1079 aa17.59■□□□□ 0.41
USP11-208ENST00000480104 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
USP11-208ENST00000480104 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.41
USP11-208ENST00000480104 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
USP11-208ENST00000480104 RRAGCQ9HB90 399 aa17.58■□□□□ 0.4
USP11-208ENST00000480104 CABP2Q9NPB3 220 aa17.58■□□□□ 0.4
USP11-208ENST00000480104 FOXN1O15353 648 aa17.57■□□□□ 0.4
USP11-208ENST00000480104 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
USP11-208ENST00000480104 USP54Q70EL1 1684 aa17.57■□□□□ 0.4
USP11-208ENST00000480104 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
USP11-208ENST00000480104 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
USP11-208ENST00000480104 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
USP11-208ENST00000480104 USP47Q96K76 1375 aa17.55■□□□□ 0.4
USP11-208ENST00000480104 C5P01031 1676 aa17.55■□□□□ 0.4
USP11-208ENST00000480104 SMIM5Q71RC9 77 aa17.55■□□□□ 0.4
USP11-208ENST00000480104 MLLT1Q03111 559 aaPredicted RBP17.54■□□□□ 0.4
USP11-208ENST00000480104 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
USP11-208ENST00000480104 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
USP11-208ENST00000480104 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
USP11-208ENST00000480104 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.4
USP11-208ENST00000480104 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.4
USP11-208ENST00000480104 PHF14O94880 888 aa17.52■□□□□ 0.4
USP11-208ENST00000480104 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
USP11-208ENST00000480104 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.39
USP11-208ENST00000480104 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.39
USP11-208ENST00000480104 A0A0G2JLW4 131 aa17.51■□□□□ 0.39
USP11-208ENST00000480104 AK7Q96M32 723 aa17.5■□□□□ 0.39
USP11-208ENST00000480104 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
USP11-208ENST00000480104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
USP11-208ENST00000480104 FCHSD2O94868 740 aa17.49■□□□□ 0.39
USP11-208ENST00000480104 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
USP11-208ENST00000480104 N4BP2Q86UW6 1770 aaPredicted RBP17.48■□□□□ 0.39
USP11-208ENST00000480104 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
USP11-208ENST00000480104 TNRC18O15417 2968 aaPredicted RBP17.48■□□□□ 0.39
USP11-208ENST00000480104 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
USP11-208ENST00000480104 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
USP11-208ENST00000480104 TGFB2P61812 414 aa17.47■□□□□ 0.39
USP11-208ENST00000480104 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
USP11-208ENST00000480104 MMP10P09238 476 aa17.46■□□□□ 0.39
USP11-208ENST00000480104 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
USP11-208ENST00000480104 KIF13BQ9NQT8 1826 aa17.45■□□□□ 0.38
USP11-208ENST00000480104 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
USP11-208ENST00000480104 DPEP1P16444 411 aa17.45■□□□□ 0.38
USP11-208ENST00000480104 NSD3Q9BZ95 1437 aa17.45■□□□□ 0.38
USP11-208ENST00000480104 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
USP11-208ENST00000480104 PDE4DIPQ5VU43 2346 aa17.43■□□□□ 0.38
USP11-208ENST00000480104 RGS19P49795 217 aa17.43■□□□□ 0.38
USP11-208ENST00000480104 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
USP11-208ENST00000480104 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
USP11-208ENST00000480104 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
USP11-208ENST00000480104 SSFA2P28290 1259 aa17.42■□□□□ 0.38
USP11-208ENST00000480104 LBX1P52954 281 aa17.42■□□□□ 0.38
USP11-208ENST00000480104 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
USP11-208ENST00000480104 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
USP11-208ENST00000480104 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
USP11-208ENST00000480104 CREBZFQ9NS37 354 aa17.41■□□□□ 0.38
USP11-208ENST00000480104 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
USP11-208ENST00000480104 LTN1O94822 1766 aa17.4■□□□□ 0.38
USP11-208ENST00000480104 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.38
USP11-208ENST00000480104 MEGF6O75095 1541 aa17.39■□□□□ 0.37
USP11-208ENST00000480104 DCAF5Q96JK2 942 aa17.39■□□□□ 0.37
USP11-208ENST00000480104 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
USP11-208ENST00000480104 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
USP11-208ENST00000480104 KCNA3P22001 575 aa17.38■□□□□ 0.37
USP11-208ENST00000480104 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
USP11-208ENST00000480104 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
USP11-208ENST00000480104 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
USP11-208ENST00000480104 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
USP11-208ENST00000480104 LINC00116Q8NCU8 138 aa17.35■□□□□ 0.37
USP11-208ENST00000480104 WBP1LQ9NX94 342 aa17.35■□□□□ 0.37
USP11-208ENST00000480104 ZC3H4Q9UPT8 1303 aaKnown RBP17.35■□□□□ 0.37
USP11-208ENST00000480104 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
USP11-208ENST00000480104 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
USP11-208ENST00000480104 GNPATO15228 680 aa17.34■□□□□ 0.37
USP11-208ENST00000480104 NBPF1Q3BBV0 1214 aa17.34■□□□□ 0.37
USP11-208ENST00000480104 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
USP11-208ENST00000480104 NME9Q86XW9 330 aa17.34■□□□□ 0.37
USP11-208ENST00000480104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP11-208ENST00000480104 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
USP11-208ENST00000480104 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
USP11-208ENST00000480104 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.36
USP11-208ENST00000480104 PIM2Q9P1W9 311 aa17.33■□□□□ 0.36
USP11-208ENST00000480104 VEGFBP49765 207 aa17.32■□□□□ 0.36
USP11-208ENST00000480104 RASSF7Q02833 373 aa17.32■□□□□ 0.36
USP11-208ENST00000480104 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
USP11-208ENST00000480104 IP6K1Q92551 441 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms