RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 NSD2O96028 1365 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 ZNF827Q17R98 1081 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
FN1-220ENST00000480024 INSRP06213 1382 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 PTGER2P43116 358 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
FN1-220ENST00000480024 HSP90AB2PQ58FF8 381 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
FN1-220ENST00000480024 RAPGEF4Q8WZA2 1011 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 MTFR1LQ9H019 292 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
FN1-220ENST00000480024 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 TOGARAM1Q9Y4F4 1720 aa9.28□□□□□ -0.92
FN1-220ENST00000480024 KCNQ4P56696 695 aa9.27□□□□□ -0.93
FN1-220ENST00000480024 KIF24Q5T7B8 1368 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
FN1-220ENST00000480024 TATP17735 454 aaPredicted RBP9.26□□□□□ -0.93
FN1-220ENST00000480024 SLC27A3Q5K4L6 730 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 AKT1S1Q96B36 256 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
FN1-220ENST00000480024 CGNL1Q0VF96 1302 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 PCDH11XQ9BZA7 1347 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 ITGB4P16144 1822 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 C5P01031 1676 aa9.26□□□□□ -0.93
FN1-220ENST00000480024 YY1P25490 414 aa9.25□□□□□ -0.93
FN1-220ENST00000480024 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
FN1-220ENST00000480024 CCNL1Q9UK58 526 aaPredicted RBP9.25□□□□□ -0.93
FN1-220ENST00000480024 PNPLA7Q6ZV29 1317 aa9.25□□□□□ -0.93
FN1-220ENST00000480024 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
FN1-220ENST00000480024 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
FN1-220ENST00000480024 TFCP2L1Q9NZI6 479 aa9.24□□□□□ -0.93
FN1-220ENST00000480024 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
FN1-220ENST00000480024 NCAPD2Q15021 1401 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 CYP27B1O15528 508 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
FN1-220ENST00000480024 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
FN1-220ENST00000480024 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
FN1-220ENST00000480024 ARXQ96QS3 562 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 SYT17Q9BSW7 474 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 PALLDQ8WX93 1383 aa9.23□□□□□ -0.93
FN1-220ENST00000480024 CHD4Q14839 1912 aa9.21□□□□□ -0.93
FN1-220ENST00000480024 MSH5O43196 834 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 POLD1P28340 1107 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 POLKQ9UBT6 870 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 C4BP0C0L5 1744 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 WASHC2AQ641Q2 1341 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 MAP3K5Q99683 1374 aa9.21□□□□□ -0.94
FN1-220ENST00000480024 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
FN1-220ENST00000480024 EYA1Q99502 592 aa9.2□□□□□ -0.94
FN1-220ENST00000480024 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
FN1-220ENST00000480024 EIF4A2Q14240 407 aaKnown RBP9.19□□□□□ -0.94
FN1-220ENST00000480024 MSL1Q68DK7 614 aa9.19□□□□□ -0.94
FN1-220ENST00000480024 PANK3Q9H999 370 aa9.19□□□□□ -0.94
FN1-220ENST00000480024 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
FN1-220ENST00000480024 UTRNP46939 3433 aa9.18□□□□□ -0.94
FN1-220ENST00000480024 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
FN1-220ENST00000480024 PIGBQ92521 554 aa9.18□□□□□ -0.94
FN1-220ENST00000480024 IGSF1Q8N6C5 1336 aa9.17□□□□□ -0.94
FN1-220ENST00000480024 NKX1-1Q15270 411 aaPredicted RBP9.17□□□□□ -0.94
FN1-220ENST00000480024 PELP1Q8IZL8 1130 aaKnown RBP9.17□□□□□ -0.94
FN1-220ENST00000480024 NLGN2Q8NFZ4 835 aa9.17□□□□□ -0.94
FN1-220ENST00000480024 SMARCC1Q92922 1105 aaPredicted RBP9.17□□□□□ -0.94
FN1-220ENST00000480024 AK7Q96M32 723 aa9.17□□□□□ -0.94
FN1-220ENST00000480024 PHF14O94880 888 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 PHKG2P15735 406 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 GPR162Q16538 588 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
FN1-220ENST00000480024 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
FN1-220ENST00000480024 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
FN1-220ENST00000480024 SMIM5Q71RC9 77 aa9.15□□□□□ -0.94
FN1-220ENST00000480024 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
FN1-220ENST00000480024 ASAP1Q9ULH1 1129 aa9.15□□□□□ -0.94
FN1-220ENST00000480024 PLEKHG2Q9H7P9 1386 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 SIK1P57059 783 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
FN1-220ENST00000480024 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 KNSTRNQ9Y448 316 aa9.14□□□□□ -0.95
FN1-220ENST00000480024 COL5A3P25940 1745 aaPredicted RBP9.14□□□□□ -0.95
FN1-220ENST00000480024 KDM6AO15550 1401 aaPredicted RBP9.14□□□□□ -0.95
FN1-220ENST00000480024 KDRP35968 1356 aa9.13□□□□□ -0.95
FN1-220ENST00000480024 KIF7Q2M1P5 1343 aa9.13□□□□□ -0.95
FN1-220ENST00000480024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.13□□□□□ -0.95
FN1-220ENST00000480024 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms