RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
C9orf78-205ENST00000480023 CUL4AQ13619 759 aa16.52■□□□□ 0.24
C9orf78-205ENST00000480023 RNF214Q8ND24 703 aa16.52■□□□□ 0.24
C9orf78-205ENST00000480023 ABCC3O15438 1527 aa16.52■□□□□ 0.23
C9orf78-205ENST00000480023 ERC2O15083 957 aa16.52■□□□□ 0.23
C9orf78-205ENST00000480023 PHF14O94880 888 aa16.52■□□□□ 0.23
C9orf78-205ENST00000480023 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.23
C9orf78-205ENST00000480023 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.23
C9orf78-205ENST00000480023 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.23
C9orf78-205ENST00000480023 MBIPQ9NS73 344 aa16.52■□□□□ 0.23
C9orf78-205ENST00000480023 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
C9orf78-205ENST00000480023 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
C9orf78-205ENST00000480023 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
C9orf78-205ENST00000480023 INTS4Q96HW7 963 aaKnown RBP16.51■□□□□ 0.23
C9orf78-205ENST00000480023 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
C9orf78-205ENST00000480023 CHAMP1Q96JM3 812 aa16.51■□□□□ 0.23
C9orf78-205ENST00000480023 SPTLC3Q9NUV7 552 aa16.5■□□□□ 0.23
C9orf78-205ENST00000480023 PTPRMP28827 1452 aa16.5■□□□□ 0.23
C9orf78-205ENST00000480023 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
C9orf78-205ENST00000480023 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
C9orf78-205ENST00000480023 KLHL34Q8N239 644 aa16.49■□□□□ 0.23
C9orf78-205ENST00000480023 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
C9orf78-205ENST00000480023 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
C9orf78-205ENST00000480023 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
C9orf78-205ENST00000480023 RGS12O14924 1447 aa16.49■□□□□ 0.23
C9orf78-205ENST00000480023 CPSF1Q10570 1443 aaKnown RBP16.49■□□□□ 0.23
C9orf78-205ENST00000480023 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
C9orf78-205ENST00000480023 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
C9orf78-205ENST00000480023 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
C9orf78-205ENST00000480023 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
C9orf78-205ENST00000480023 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
C9orf78-205ENST00000480023 THUMPD2Q9BTF0 503 aaKnown RBP16.48■□□□□ 0.23
C9orf78-205ENST00000480023 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
C9orf78-205ENST00000480023 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
C9orf78-205ENST00000480023 C8orf58Q8NAV2 365 aa16.47■□□□□ 0.23
C9orf78-205ENST00000480023 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
C9orf78-205ENST00000480023 DLG5Q8TDM6 1919 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
C9orf78-205ENST00000480023 ARID3AQ99856 593 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 TUBGCP6Q96RT7 1819 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 NEK4P51957 841 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 ANAPC15P60006 121 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
C9orf78-205ENST00000480023 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
C9orf78-205ENST00000480023 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
C9orf78-205ENST00000480023 KIF20AO95235 890 aa16.45■□□□□ 0.22
C9orf78-205ENST00000480023 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
C9orf78-205ENST00000480023 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
C9orf78-205ENST00000480023 ELL2O00472 640 aaPredicted RBP16.45■□□□□ 0.22
C9orf78-205ENST00000480023 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
C9orf78-205ENST00000480023 YTHDC2Q9H6S0 1430 aaKnown RBP16.44■□□□□ 0.22
C9orf78-205ENST00000480023 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
C9orf78-205ENST00000480023 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
C9orf78-205ENST00000480023 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
C9orf78-205ENST00000480023 LETM1O95202 739 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-205ENST00000480023 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
C9orf78-205ENST00000480023 USP25Q9UHP3 1055 aa16.42■□□□□ 0.22
C9orf78-205ENST00000480023 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
C9orf78-205ENST00000480023 MSH6P52701 1360 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 ADCY5O95622 1261 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 HMOX1P09601 288 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 IL13P35225 146 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 PDE1AP54750 535 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
C9orf78-205ENST00000480023 ATP7BP35670 1465 aa16.41■□□□□ 0.22
C9orf78-205ENST00000480023 GADD45BO75293 160 aaPredicted RBP16.4■□□□□ 0.22
C9orf78-205ENST00000480023 MCCP23508 829 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 PTPRCP08575 1304 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 RPAP1Q9BWH6 1393 aaPredicted RBP16.4■□□□□ 0.22
C9orf78-205ENST00000480023 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 TSC1Q92574 1164 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 TTC12Q9H892 705 aaPredicted RBP16.4■□□□□ 0.22
C9orf78-205ENST00000480023 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
C9orf78-205ENST00000480023 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.22
C9orf78-205ENST00000480023 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
C9orf78-205ENST00000480023 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
C9orf78-205ENST00000480023 ZNF830Q96NB3 372 aaPredicted RBP16.39■□□□□ 0.21
C9orf78-205ENST00000480023 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
C9orf78-205ENST00000480023 HMMRO75330 724 aa16.39■□□□□ 0.21
C9orf78-205ENST00000480023 MX1P20591 662 aa16.39■□□□□ 0.21
C9orf78-205ENST00000480023 ANKRD7Q92527 254 aa16.39■□□□□ 0.21
C9orf78-205ENST00000480023 KDM4AO75164 1064 aa16.38■□□□□ 0.21
C9orf78-205ENST00000480023 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
C9orf78-205ENST00000480023 CBX1P83916 185 aa16.38■□□□□ 0.21
C9orf78-205ENST00000480023 KIAA1524Q8TCG1 905 aa16.38■□□□□ 0.21
C9orf78-205ENST00000480023 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
C9orf78-205ENST00000480023 TPM3P06753 285 aa16.37■□□□□ 0.21
C9orf78-205ENST00000480023 PALD1Q9ULE6 856 aa16.37■□□□□ 0.21
C9orf78-205ENST00000480023 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
C9orf78-205ENST00000480023 TCHHQ07283 1943 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms