RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 IBSPP21815 317 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
PTPRE-208ENST00000479896 ANKRD62A6NC57 917 aa14.64□□□□□ -0.07
PTPRE-208ENST00000479896 GOLGA6L10A6NI86 522 aa14.64□□□□□ -0.07
PTPRE-208ENST00000479896 IDH1O75874 414 aaKnown RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 BLOC1S2Q6QNY1 142 aa14.64□□□□□ -0.07
PTPRE-208ENST00000479896 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
PTPRE-208ENST00000479896 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 CAVIN1Q6NZI2 390 aaKnown RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 PAXIP1Q6ZW49 1069 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-208ENST00000479896 MRE11P49959 708 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 TTLL12Q14166 644 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 CEP57L1Q8IYX8 460 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 CEP131Q9UPN4 1083 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 WDR33Q9C0J8 1336 aaKnown RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 PDRG1Q9NUG6 133 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
PTPRE-208ENST00000479896 TNMDQ9H2S6 317 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 ANKIB1Q9P2G1 1089 aa14.63□□□□□ -0.07
PTPRE-208ENST00000479896 ANKRD30BQ9BXX2 1392 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
PTPRE-208ENST00000479896 CCDC192P0DO97 292 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 KRT85P78386 507 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 H0YHG0 523 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 ABCF2Q9UG63 623 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 EHBP1L1Q8N3D4 1523 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 CWC15Q9P013 229 aaKnown RBP14.62□□□□□ -0.07
PTPRE-208ENST00000479896 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
PTPRE-208ENST00000479896 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
PTPRE-208ENST00000479896 RAPGEF3O95398 923 aa14.61□□□□□ -0.07
PTPRE-208ENST00000479896 RPGRQ92834 1020 aaKnown RBP14.61□□□□□ -0.07
PTPRE-208ENST00000479896 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
PTPRE-208ENST00000479896 LARP1BQ659C4 914 aaKnown RBP14.61□□□□□ -0.07
PTPRE-208ENST00000479896 HSP90AB3PQ58FF7 597 aa14.61□□□□□ -0.07
PTPRE-208ENST00000479896 FANCIQ9NVI1 1328 aa14.61□□□□□ -0.07
PTPRE-208ENST00000479896 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
PTPRE-208ENST00000479896 NUDT16Q96DE0 195 aaKnown RBP14.61□□□□□ -0.07
PTPRE-208ENST00000479896 FCHSD2O94868 740 aa14.6□□□□□ -0.07
PTPRE-208ENST00000479896 CCDC85AQ96PX6 553 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-208ENST00000479896 AXDND1Q5T1B0 1012 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-208ENST00000479896 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
PTPRE-208ENST00000479896 BCL11BQ9C0K0 894 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-208ENST00000479896 EHMT1Q9H9B1 1298 aa14.6□□□□□ -0.07
PTPRE-208ENST00000479896 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
PTPRE-208ENST00000479896 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
PTPRE-208ENST00000479896 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 CUL5Q93034 780 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
PTPRE-208ENST00000479896 IQCEQ6IPM2 695 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 PIBF1Q8WXW3 757 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 CCDC97Q96F63 343 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-208ENST00000479896 GBP2P32456 591 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-208ENST00000479896 AMOTQ4VCS5 1084 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 JAKMIP3Q5VZ66 844 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 BCAR3O75815 825 aa14.59□□□□□ -0.07
PTPRE-208ENST00000479896 ENOX2Q16206 610 aaKnown RBP14.59□□□□□ -0.07
PTPRE-208ENST00000479896 JAKMIP1Q96N16 626 aaKnown RBP14.59□□□□□ -0.07
PTPRE-208ENST00000479896 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.08
PTPRE-208ENST00000479896 CWC27Q6UX04 472 aaKnown RBP14.58□□□□□ -0.08
PTPRE-208ENST00000479896 LRPPRCP42704 1394 aaKnown RBP14.58□□□□□ -0.08
PTPRE-208ENST00000479896 HECW1Q76N89 1606 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 TRAK2O60296 914 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 NFE2L2Q16236 605 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
PTPRE-208ENST00000479896 SLC5A1P13866 664 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 SPATA32Q96LK8 384 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 DAPK1P53355 1430 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 CETN2P41208 172 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 MVPQ14764 893 aaKnown RBP14.57□□□□□ -0.08
PTPRE-208ENST00000479896 EFCAB5A4FU69 1503 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
PTPRE-208ENST00000479896 SSR1P43307 286 aaKnown RBP14.57□□□□□ -0.08
PTPRE-208ENST00000479896 NGLY1Q96IV0 654 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 CFTRP13569 1480 aa14.57□□□□□ -0.08
PTPRE-208ENST00000479896 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-208ENST00000479896 TROQ12816 1431 aaPredicted RBP14.56□□□□□ -0.08
PTPRE-208ENST00000479896 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
PTPRE-208ENST00000479896 CHD1LQ86WJ1 897 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 WDR78Q5VTH9 848 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 TAF4BQ92750 862 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 TSPYL1Q9H0U9 437 aa14.56□□□□□ -0.08
PTPRE-208ENST00000479896 RAB11FIP3O75154 756 aa14.55□□□□□ -0.08
PTPRE-208ENST00000479896 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
PTPRE-208ENST00000479896 EPRSP07814 1512 aaKnown RBP14.55□□□□□ -0.08
PTPRE-208ENST00000479896 SNAPC4Q5SXM2 1469 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms