RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 KIF16BQ96L93 1317 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 IFT172Q9UG01 1749 aa14.4□□□□□ -0.1
RAPGEF3-209ENST00000479866 IP6K1Q92551 441 aa14.39□□□□□ -0.11
RAPGEF3-209ENST00000479866 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
RAPGEF3-209ENST00000479866 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
RAPGEF3-209ENST00000479866 CPS1P31327 1500 aa14.39□□□□□ -0.11
RAPGEF3-209ENST00000479866 CCDC27Q2M243 656 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 TTC5Q8N0Z6 440 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 TMEM57Q8N5G2 664 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 SBNO1A3KN83 1393 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 PDE3AQ14432 1141 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 KAT6BQ8WYB5 2073 aa14.38□□□□□ -0.11
RAPGEF3-209ENST00000479866 HDGFL1Q5TGJ6 251 aa14.37□□□□□ -0.11
RAPGEF3-209ENST00000479866 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF3-209ENST00000479866 TRIM27P14373 513 aa14.37□□□□□ -0.11
RAPGEF3-209ENST00000479866 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
RAPGEF3-209ENST00000479866 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 RLBP1P12271 317 aa14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 TECPR2O15040 1411 aa14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 API5Q9BZZ5 524 aaKnown RBP14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 ZNF521Q96K83 1311 aa14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 CD163L1Q9NR16 1453 aa14.36□□□□□ -0.11
RAPGEF3-209ENST00000479866 ANXA1P04083 346 aa14.35□□□□□ -0.11
RAPGEF3-209ENST00000479866 F6X3S4 739 aa14.35□□□□□ -0.11
RAPGEF3-209ENST00000479866 UPF2Q9HAU5 1272 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-209ENST00000479866 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
RAPGEF3-209ENST00000479866 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF3-209ENST00000479866 TAF7Q15545 349 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 ANKRD45Q5TZF3 282 aa14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 ARHGAP23Q9P227 1491 aa14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 UBAP1LF5GYI3 381 aa14.34□□□□□ -0.11
RAPGEF3-209ENST00000479866 AATKQ6ZMQ8 1374 aa14.33□□□□□ -0.11
RAPGEF3-209ENST00000479866 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.11
RAPGEF3-209ENST00000479866 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
RAPGEF3-209ENST00000479866 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
RAPGEF3-209ENST00000479866 SLC39A6Q13433 755 aa14.33□□□□□ -0.12
RAPGEF3-209ENST00000479866 SLIT1O75093 1534 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 BRINP3Q76B58 766 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 MYOM1P52179 1685 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 VAMP4O75379 141 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 MYL6BP14649 208 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 CABP4P57796 275 aa14.32□□□□□ -0.12
RAPGEF3-209ENST00000479866 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF3-209ENST00000479866 AXIN2Q9Y2T1 843 aa14.31□□□□□ -0.12
RAPGEF3-209ENST00000479866 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
RAPGEF3-209ENST00000479866 IL16Q14005 1332 aa14.31□□□□□ -0.12
RAPGEF3-209ENST00000479866 ARHGEF25Q86VW2 580 aa14.3□□□□□ -0.12
RAPGEF3-209ENST00000479866 DIP2AQ14689 1571 aa14.3□□□□□ -0.12
RAPGEF3-209ENST00000479866 PDE4AP27815 886 aa14.3□□□□□ -0.12
RAPGEF3-209ENST00000479866 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
RAPGEF3-209ENST00000479866 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
RAPGEF3-209ENST00000479866 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF3-209ENST00000479866 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-209ENST00000479866 IGHDP01880 384 aa14.28□□□□□ -0.12
RAPGEF3-209ENST00000479866 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-209ENST00000479866 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-209ENST00000479866 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
RAPGEF3-209ENST00000479866 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-209ENST00000479866 INSRP06213 1382 aa14.27□□□□□ -0.12
RAPGEF3-209ENST00000479866 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
RAPGEF3-209ENST00000479866 C9orf78Q9NZ63 289 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF3-209ENST00000479866 IL17REQ8NFR9 667 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 BTG4Q9NY30 223 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 KIAA0232Q92628 1395 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 RNF123Q5XPI4 1314 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 PNPLA6Q8IY17 1366 aa14.27□□□□□ -0.13
RAPGEF3-209ENST00000479866 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
RAPGEF3-209ENST00000479866 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
RAPGEF3-209ENST00000479866 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-209ENST00000479866 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
RAPGEF3-209ENST00000479866 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 KCNQ3O43525 872 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 TOM1O60784 492 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 NRXN3Q9Y4C0 1643 aa14.25□□□□□ -0.13
RAPGEF3-209ENST00000479866 MRPL50Q8N5N7 158 aaKnown RBP14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 MAP3K5Q99683 1374 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 G2E3Q7L622 706 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 CHL1O00533 1208 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 APPP05067 770 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms