RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
APTX-223ENST00000479656 RTF1Q92541 710 aaKnown RBP14.59□□□□□ -0.07
APTX-223ENST00000479656 COL5A2P05997 1499 aaPredicted RBP14.59□□□□□ -0.07
APTX-223ENST00000479656 AMOTQ4VCS5 1084 aa14.59□□□□□ -0.07
APTX-223ENST00000479656 FANCIQ9NVI1 1328 aa14.58□□□□□ -0.08
APTX-223ENST00000479656 HTATSF1O43719 755 aaKnown RBP14.57□□□□□ -0.08
APTX-223ENST00000479656 TATP17735 454 aaPredicted RBP14.57□□□□□ -0.08
APTX-223ENST00000479656 ZNF853P0CG23 659 aa14.57□□□□□ -0.08
APTX-223ENST00000479656 GNAI1P63096 354 aa14.57□□□□□ -0.08
APTX-223ENST00000479656 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
APTX-223ENST00000479656 FKBP8Q14318 412 aa14.57□□□□□ -0.08
APTX-223ENST00000479656 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
APTX-223ENST00000479656 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
APTX-223ENST00000479656 IFT57Q9NWB7 429 aa14.57□□□□□ -0.08
APTX-223ENST00000479656 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 JCADQ9P266 1359 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 NEFLP07196 543 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 HSPA1LP34931 641 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
APTX-223ENST00000479656 IL17REQ8NFR9 667 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 CARD10Q9BWT7 1032 aa14.56□□□□□ -0.08
APTX-223ENST00000479656 FAM208AQ9UK61 1670 aaKnown RBP14.56□□□□□ -0.08
APTX-223ENST00000479656 RNF123Q5XPI4 1314 aa14.55□□□□□ -0.08
APTX-223ENST00000479656 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
APTX-223ENST00000479656 COL14A1Q05707 1796 aaKnown RBP14.55□□□□□ -0.08
APTX-223ENST00000479656 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
APTX-223ENST00000479656 USP35Q9P2H5 1018 aa14.55□□□□□ -0.08
APTX-223ENST00000479656 C1orf141Q5JVX7 400 aa14.54□□□□□ -0.08
APTX-223ENST00000479656 LGR6Q9HBX8 967 aa14.54□□□□□ -0.08
APTX-223ENST00000479656 MEGF6O75095 1541 aa14.54□□□□□ -0.08
APTX-223ENST00000479656 CRB1P82279 1406 aa14.54□□□□□ -0.08
APTX-223ENST00000479656 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
APTX-223ENST00000479656 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
APTX-223ENST00000479656 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
APTX-223ENST00000479656 CHL1O00533 1208 aa14.52□□□□□ -0.08
APTX-223ENST00000479656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.081e-6■□□□□ 10.8
APTX-223ENST00000479656 BCAR3O75815 825 aa14.52□□□□□ -0.09
APTX-223ENST00000479656 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
APTX-223ENST00000479656 PLIN1O60240 522 aa14.51□□□□□ -0.09
APTX-223ENST00000479656 IL2RBP14784 551 aa14.51□□□□□ -0.09
APTX-223ENST00000479656 RNMTO43148 476 aaKnown RBP14.5□□□□□ -0.09
APTX-223ENST00000479656 RARSP54136 660 aaKnown RBP14.5□□□□□ -0.09
APTX-223ENST00000479656 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
APTX-223ENST00000479656 PHKG2P15735 406 aa14.5□□□□□ -0.09
APTX-223ENST00000479656 TAF7Q15545 349 aaPredicted RBP14.5□□□□□ -0.09
APTX-223ENST00000479656 ZCRB1Q8TBF4 217 aaKnown RBP14.5□□□□□ -0.09
APTX-223ENST00000479656 SPATA31A6Q5VVP1 1343 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 CYP27B1O15528 508 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 CT47B1P0C2W7 299 aaPredicted RBP14.49□□□□□ -0.09
APTX-223ENST00000479656 IFNL2Q8IZJ0 200 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 TSPYL6Q8N831 410 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 C8orf58Q8NAV2 365 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 CEMIPQ8WUJ3 1361 aa14.49□□□□□ -0.09
APTX-223ENST00000479656 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
APTX-223ENST00000479656 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
APTX-223ENST00000479656 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
APTX-223ENST00000479656 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
APTX-223ENST00000479656 VAMP4O75379 141 aa14.47□□□□□ -0.09
APTX-223ENST00000479656 TEFQ10587 303 aa14.47□□□□□ -0.09
APTX-223ENST00000479656 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
APTX-223ENST00000479656 TWISTNBQ3B726 338 aaPredicted RBP14.46□□□□□ -0.09
APTX-223ENST00000479656 SLIT2O94813 1529 aa14.46□□□□□ -0.09
APTX-223ENST00000479656 DDX54Q8TDD1 881 aaKnown RBP14.46□□□□□ -0.1
APTX-223ENST00000479656 UNC5CLQ8IV45 518 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.45□□□□□ -0.1
APTX-223ENST00000479656 SSH1Q8WYL5 1049 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 BABAM1Q9NWV8 329 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
APTX-223ENST00000479656 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 LRP6O75581 1613 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 SPATA31A1Q5TZJ5 1347 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 PKD1L3Q7Z443 1732 aa14.45□□□□□ -0.1
APTX-223ENST00000479656 PARP4Q9UKK3 1724 aaKnown RBP14.45□□□□□ -0.1
APTX-223ENST00000479656 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
APTX-223ENST00000479656 DCAF5Q96JK2 942 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 PCDH11XQ9BZA7 1347 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 PCDH11YQ9BZA8 1340 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 BTBD11A6QL63 1104 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
APTX-223ENST00000479656 C20orf194Q5TEA3 1177 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 MEX3CQ5U5Q3 659 aaKnown RBP14.44□□□□□ -0.1
APTX-223ENST00000479656 FNBP4Q8N3X1 1017 aaPredicted RBP14.44□□□□□ -0.1
APTX-223ENST00000479656 SMC4Q9NTJ3 1288 aa14.44□□□□□ -0.1
APTX-223ENST00000479656 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
APTX-223ENST00000479656 KDM6AO15550 1401 aaPredicted RBP14.43□□□□□ -0.1
APTX-223ENST00000479656 SPATA31A5Q5VU36 1347 aa14.43□□□□□ -0.1
APTX-223ENST00000479656 SPATA31A7Q8IWB4 1347 aa14.43□□□□□ -0.1
APTX-223ENST00000479656 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
APTX-223ENST00000479656 KCNQ3O43525 872 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 NFATC2IPQ8NCF5 419 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 SLC52A2Q9HAB3 445 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
APTX-223ENST00000479656 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 DISP2A7MBM2 1401 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 BCL9LQ86UU0 1499 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms