RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
GPNMB-211ENST00000479625 ZNF827Q17R98 1081 aa14.15□□□□□ -0.14
GPNMB-211ENST00000479625 IFFO2Q5TF58 517 aa14.15□□□□□ -0.14
GPNMB-211ENST00000479625 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
GPNMB-211ENST00000479625 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
GPNMB-211ENST00000479625 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
GPNMB-211ENST00000479625 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
GPNMB-211ENST00000479625 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
GPNMB-211ENST00000479625 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-211ENST00000479625 ARHGEF25Q86VW2 580 aa14.13□□□□□ -0.15
GPNMB-211ENST00000479625 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
GPNMB-211ENST00000479625 LY75O60449 1722 aa14.12□□□□□ -0.15
GPNMB-211ENST00000479625 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
GPNMB-211ENST00000479625 EXOC5O00471 708 aa14.11□□□□□ -0.15
GPNMB-211ENST00000479625 GPR162Q16538 588 aa14.11□□□□□ -0.15
GPNMB-211ENST00000479625 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
GPNMB-211ENST00000479625 TTC21BQ7Z4L5 1316 aa14.1□□□□□ -0.15
GPNMB-211ENST00000479625 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
GPNMB-211ENST00000479625 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
GPNMB-211ENST00000479625 RGPD2P0DJD1 1756 aa14.09□□□□□ -0.15
GPNMB-211ENST00000479625 NLGN2Q8NFZ4 835 aa14.08□□□□□ -0.16
GPNMB-211ENST00000479625 EVX2Q03828 476 aa14.07□□□□□ -0.16
GPNMB-211ENST00000479625 KCNH5Q8NCM2 988 aa14.07□□□□□ -0.16
GPNMB-211ENST00000479625 ERBB3P21860 1342 aa14.06□□□□□ -0.16
GPNMB-211ENST00000479625 PNPLA7Q6ZV29 1317 aa14.06□□□□□ -0.16
GPNMB-211ENST00000479625 C5P01031 1676 aa14.05□□□□□ -0.16
GPNMB-211ENST00000479625 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
GPNMB-211ENST00000479625 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
GPNMB-211ENST00000479625 IL2RBP14784 551 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
GPNMB-211ENST00000479625 POLD1P28340 1107 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 KCNQ4P56696 695 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 ATP10DQ9P241 1426 aa14.03□□□□□ -0.16
GPNMB-211ENST00000479625 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
GPNMB-211ENST00000479625 CD163L1Q9NR16 1453 aa14□□□□□ -0.17
GPNMB-211ENST00000479625 NSD2O96028 1365 aa14□□□□□ -0.17
GPNMB-211ENST00000479625 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
GPNMB-211ENST00000479625 SLC16A10Q8TF71 515 aa14□□□□□ -0.17
GPNMB-211ENST00000479625 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
GPNMB-211ENST00000479625 USP31Q70CQ4 1352 aa13.99□□□□□ -0.17
GPNMB-211ENST00000479625 TOGARAM1Q9Y4F4 1720 aa13.99□□□□□ -0.17
GPNMB-211ENST00000479625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
GPNMB-211ENST00000479625 ANKRD24Q8TF21 1146 aa13.99□□□□□ -0.17
GPNMB-211ENST00000479625 NME9Q86XW9 330 aa13.98□□□□□ -0.17
GPNMB-211ENST00000479625 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
GPNMB-211ENST00000479625 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
GPNMB-211ENST00000479625 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
GPNMB-211ENST00000479625 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.17
GPNMB-211ENST00000479625 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.17
GPNMB-211ENST00000479625 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
GPNMB-211ENST00000479625 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
GPNMB-211ENST00000479625 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-211ENST00000479625 ADCY9O60503 1353 aa13.96□□□□□ -0.18
GPNMB-211ENST00000479625 MEGF6O75095 1541 aa13.95□□□□□ -0.18
GPNMB-211ENST00000479625 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-211ENST00000479625 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
GPNMB-211ENST00000479625 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
GPNMB-211ENST00000479625 ITGB4P16144 1822 aa13.94□□□□□ -0.18
GPNMB-211ENST00000479625 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
GPNMB-211ENST00000479625 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
GPNMB-211ENST00000479625 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
GPNMB-211ENST00000479625 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-211ENST00000479625 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-211ENST00000479625 FKBP8Q14318 412 aa13.92□□□□□ -0.18
GPNMB-211ENST00000479625 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
GPNMB-211ENST00000479625 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-211ENST00000479625 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-211ENST00000479625 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
GPNMB-211ENST00000479625 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
GPNMB-211ENST00000479625 HSPA6P17066 643 aa13.91□□□□□ -0.18
GPNMB-211ENST00000479625 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
GPNMB-211ENST00000479625 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
GPNMB-211ENST00000479625 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
GPNMB-211ENST00000479625 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.19
GPNMB-211ENST00000479625 USP47Q96K76 1375 aa13.88□□□□□ -0.19
GPNMB-211ENST00000479625 WDR90Q96KV7 1748 aa13.88□□□□□ -0.19
GPNMB-211ENST00000479625 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
GPNMB-211ENST00000479625 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
GPNMB-211ENST00000479625 IP6K1Q92551 441 aa13.87□□□□□ -0.19
GPNMB-211ENST00000479625 MAP2P11137 1827 aaKnown RBP13.86□□□□□ -0.19
GPNMB-211ENST00000479625 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
GPNMB-211ENST00000479625 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
GPNMB-211ENST00000479625 FBLN1P23142 703 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
GPNMB-211ENST00000479625 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 ZCRB1Q8TBF4 217 aaKnown RBP13.85□□□□□ -0.19
GPNMB-211ENST00000479625 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
GPNMB-211ENST00000479625 HOXC9P31274 260 aa13.84□□□□□ -0.19
GPNMB-211ENST00000479625 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
GPNMB-211ENST00000479625 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
GPNMB-211ENST00000479625 BRCA1P38398 1863 aaKnown RBP13.83□□□□□ -0.2
GPNMB-211ENST00000479625 KIF3CO14782 793 aa13.83□□□□□ -0.2
GPNMB-211ENST00000479625 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
GPNMB-211ENST00000479625 PALLDQ8WX93 1383 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms