RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
DDX56-211ENST00000479602 PAPPAQ13219 1627 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
DDX56-211ENST00000479602 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 YY1P25490 414 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
DDX56-211ENST00000479602 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
DDX56-211ENST00000479602 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
DDX56-211ENST00000479602 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
DDX56-211ENST00000479602 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
DDX56-211ENST00000479602 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.45
DDX56-211ENST00000479602 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
DDX56-211ENST00000479602 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
DDX56-211ENST00000479602 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
DDX56-211ENST00000479602 AMPHP49418 695 aa12.2□□□□□ -0.46
DDX56-211ENST00000479602 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
DDX56-211ENST00000479602 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
DDX56-211ENST00000479602 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
DDX56-211ENST00000479602 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
DDX56-211ENST00000479602 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
DDX56-211ENST00000479602 LTN1O94822 1766 aa12.2□□□□□ -0.46
DDX56-211ENST00000479602 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
DDX56-211ENST00000479602 ARXQ96QS3 562 aa12.19□□□□□ -0.46
DDX56-211ENST00000479602 PANK3Q9H999 370 aa12.19□□□□□ -0.46
DDX56-211ENST00000479602 MEGF6O75095 1541 aa12.19□□□□□ -0.46
DDX56-211ENST00000479602 INSRP06213 1382 aa12.18□□□□□ -0.46
DDX56-211ENST00000479602 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
DDX56-211ENST00000479602 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
DDX56-211ENST00000479602 BTAF1O14981 1849 aa12.17□□□□□ -0.46
DDX56-211ENST00000479602 KCNQ4P56696 695 aa12.17□□□□□ -0.46
DDX56-211ENST00000479602 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
DDX56-211ENST00000479602 CYP27B1O15528 508 aa12.16□□□□□ -0.46
DDX56-211ENST00000479602 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
DDX56-211ENST00000479602 KNSTRNQ9Y448 316 aa12.16□□□□□ -0.46
DDX56-211ENST00000479602 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
DDX56-211ENST00000479602 COL24A1Q17RW2 1714 aa12.15□□□□□ -0.46
DDX56-211ENST00000479602 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
DDX56-211ENST00000479602 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
DDX56-211ENST00000479602 ZNF784Q8NCA9 323 aaPredicted RBP12.14□□□□□ -0.47
DDX56-211ENST00000479602 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
DDX56-211ENST00000479602 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
DDX56-211ENST00000479602 FLT4P35916 1363 aa12.13□□□□□ -0.47
DDX56-211ENST00000479602 SHANK3Q9BYB0 1731 aa12.12□□□□□ -0.47
DDX56-211ENST00000479602 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
DDX56-211ENST00000479602 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
DDX56-211ENST00000479602 SYTL4Q96C24 671 aaPredicted RBP12.12□□□□□ -0.47
DDX56-211ENST00000479602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.478e-6■■■□□ 14.7
DDX56-211ENST00000479602 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
DDX56-211ENST00000479602 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
DDX56-211ENST00000479602 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
DDX56-211ENST00000479602 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 PIGBQ92521 554 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 EYA1Q99502 592 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 LY75O60449 1722 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 QSER1Q2KHR3 1735 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 RGPD2P0DJD1 1756 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
DDX56-211ENST00000479602 POLD1P28340 1107 aa12.09□□□□□ -0.47
DDX56-211ENST00000479602 RALBP1Q15311 655 aa12.09□□□□□ -0.47
DDX56-211ENST00000479602 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
DDX56-211ENST00000479602 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
DDX56-211ENST00000479602 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
DDX56-211ENST00000479602 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
DDX56-211ENST00000479602 FLAD1Q8NFF5 587 aa12.07□□□□□ -0.48
DDX56-211ENST00000479602 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
DDX56-211ENST00000479602 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
DDX56-211ENST00000479602 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
DDX56-211ENST00000479602 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
DDX56-211ENST00000479602 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
DDX56-211ENST00000479602 YBX3P16989 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX56-211ENST00000479602 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
DDX56-211ENST00000479602 CEP350Q5VT06 3117 aa12.04□□□□□ -0.48
DDX56-211ENST00000479602 PHKG2P15735 406 aa12.04□□□□□ -0.48
DDX56-211ENST00000479602 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
DDX56-211ENST00000479602 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
DDX56-211ENST00000479602 GPR162Q16538 588 aa12.04□□□□□ -0.48
DDX56-211ENST00000479602 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
DDX56-211ENST00000479602 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
DDX56-211ENST00000479602 TUBGCP6Q96RT7 1819 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 LOC102724428A0A0B4J2F2 783 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 SIK1P57059 783 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 ITPK1Q13572 414 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 PRKRIP1Q9H875 184 aaPredicted RBP12.03□□□□□ -0.48
DDX56-211ENST00000479602 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 KDRP35968 1356 aa12.03□□□□□ -0.48
DDX56-211ENST00000479602 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
DDX56-211ENST00000479602 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
DDX56-211ENST00000479602 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
DDX56-211ENST00000479602 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
DDX56-211ENST00000479602 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
DDX56-211ENST00000479602 CHD4Q14839 1912 aa12.01□□□□□ -0.49
DDX56-211ENST00000479602 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
DDX56-211ENST00000479602 SSFA2P28290 1259 aa12.01□□□□□ -0.49
DDX56-211ENST00000479602 SMIM5Q71RC9 77 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms