RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 MAP3K5Q99683 1374 aa15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 PARP4Q9UKK3 1724 aaKnown RBP15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 PLCH1Q4KWH8 1693 aa15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 GNAI1P63096 354 aa15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 BTG4Q9NY30 223 aa15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 RCAN3Q9UKA8 241 aa15.55■□□□□ 0.08
TM9SF4-206ENST00000479591 NWD2Q9ULI1 1742 aa15.54■□□□□ 0.08
TM9SF4-206ENST00000479591 CRB1P82279 1406 aa15.54■□□□□ 0.08
TM9SF4-206ENST00000479591 SPATA31A6Q5VVP1 1343 aa15.54■□□□□ 0.08
TM9SF4-206ENST00000479591 LRRC37A3O60309 1634 aa15.54■□□□□ 0.08
TM9SF4-206ENST00000479591 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 SOCS7O14512 581 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 NEFLP07196 543 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 PKD1L3Q7Z443 1732 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 MEGF6O75095 1541 aa15.53■□□□□ 0.08
TM9SF4-206ENST00000479591 NRAPQ86VF7 1730 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 ZNF853P0CG23 659 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 ZNF530Q6P9A1 599 aaPredicted RBP15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 THUMPD2Q9BTF0 503 aaKnown RBP15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 SPG7Q9UQ90 795 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 GTF3C3Q9Y5Q9 886 aa15.52■□□□□ 0.08
TM9SF4-206ENST00000479591 NUTM2BA6NNL0 878 aaPredicted RBP15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 NUTM2EB1AL46 878 aaPredicted RBP15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 C1orf141Q5JVX7 400 aa15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 MCM10Q7L590 875 aa15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 NUTM2AQ8IVF1 878 aaPredicted RBP15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 OVOS2A0A0G2JMS6 1433 aa15.51■□□□□ 0.07
TM9SF4-206ENST00000479591 HSPA1LP34931 641 aa15.5■□□□□ 0.07
TM9SF4-206ENST00000479591 TSR2Q969E8 191 aaKnown RBP15.5■□□□□ 0.07
TM9SF4-206ENST00000479591 SLIT2O94813 1529 aa15.49■□□□□ 0.07
TM9SF4-206ENST00000479591 IL2RBP14784 551 aa15.49■□□□□ 0.07
TM9SF4-206ENST00000479591 BABAM1Q9NWV8 329 aa15.49■□□□□ 0.07
TM9SF4-206ENST00000479591 LAS1LQ9Y4W2 734 aaKnown RBP15.49■□□□□ 0.07
TM9SF4-206ENST00000479591 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
TM9SF4-206ENST00000479591 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
TM9SF4-206ENST00000479591 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
TM9SF4-206ENST00000479591 CHL1O00533 1208 aa15.48■□□□□ 0.07
TM9SF4-206ENST00000479591 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
TM9SF4-206ENST00000479591 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
TM9SF4-206ENST00000479591 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
TM9SF4-206ENST00000479591 IFNL2Q8IZJ0 200 aa15.47■□□□□ 0.07
TM9SF4-206ENST00000479591 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
TM9SF4-206ENST00000479591 WNK3Q9BYP7 1800 aa15.46■□□□□ 0.07
TM9SF4-206ENST00000479591 HSP90AB1P08238 724 aaKnown RBP15.46■□□□□ 0.07
TM9SF4-206ENST00000479591 PHKG2P15735 406 aa15.46■□□□□ 0.07
TM9SF4-206ENST00000479591 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
TM9SF4-206ENST00000479591 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
TM9SF4-206ENST00000479591 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 SCN11AQ9UI33 1791 aa15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 ZCRB1Q8TBF4 217 aaKnown RBP15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 THRAP3Q9Y2W1 955 aaKnown RBP15.45■□□□□ 0.06
TM9SF4-206ENST00000479591 DISP2A7MBM2 1401 aa15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 LRP6O75581 1613 aa15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 TEFQ10587 303 aa15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 CDCA7Q9BWT1 371 aaPredicted RBP15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 TSPYL4Q9UJ04 414 aa15.44■□□□□ 0.06
TM9SF4-206ENST00000479591 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 RARSP54136 660 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 FKBP8Q14318 412 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 MPRIPQ6WCQ1 1025 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 NGLY1Q96IV0 654 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 C8orf37Q96NL8 207 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 LGR6Q9HBX8 967 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 SPATA31A1Q5TZJ5 1347 aa15.43■□□□□ 0.06
TM9SF4-206ENST00000479591 SIPA1L3O60292 1781 aaPredicted RBP15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 CYP27B1O15528 508 aa15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 DCAF5Q96JK2 942 aa15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 SPATA31A5Q5VU36 1347 aa15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 SPATA31A7Q8IWB4 1347 aa15.42■□□□□ 0.06
TM9SF4-206ENST00000479591 KDM3BQ7LBC6 1761 aa15.41■□□□□ 0.06
TM9SF4-206ENST00000479591 ALDH1L2Q3SY69 923 aa15.41■□□□□ 0.06
TM9SF4-206ENST00000479591 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
TM9SF4-206ENST00000479591 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
TM9SF4-206ENST00000479591 MRC1P22897 1456 aa15.4■□□□□ 0.06
TM9SF4-206ENST00000479591 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
TM9SF4-206ENST00000479591 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-206ENST00000479591 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
TM9SF4-206ENST00000479591 VAMP4O75379 141 aa15.39■□□□□ 0.05
TM9SF4-206ENST00000479591 BCAR3O75815 825 aa15.39■□□□□ 0.05
TM9SF4-206ENST00000479591 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-206ENST00000479591 VPS72Q15906 364 aa15.39■□□□□ 0.05
TM9SF4-206ENST00000479591 BARGINQ6ZT62 677 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms