RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TNRQ92752 1358 aa16.49■□□□□ 0.23
PDZRN3-208ENST00000479530 CDK12Q9NYV4 1490 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-208ENST00000479530 DDX49Q9Y6V7 483 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-208ENST00000479530 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
PDZRN3-208ENST00000479530 ABCC4O15439 1325 aa16.48■□□□□ 0.23
PDZRN3-208ENST00000479530 FOXO3O43524 673 aa16.48■□□□□ 0.23
PDZRN3-208ENST00000479530 PKP1Q13835 747 aa16.48■□□□□ 0.23
PDZRN3-208ENST00000479530 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 GCC1Q96CN9 775 aa16.47■□□□□ 0.23
PDZRN3-208ENST00000479530 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
PDZRN3-208ENST00000479530 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
PDZRN3-208ENST00000479530 KLHL40Q2TBA0 621 aa16.46■□□□□ 0.23
PDZRN3-208ENST00000479530 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
PDZRN3-208ENST00000479530 PTCH1Q13635 1447 aa16.46■□□□□ 0.22
PDZRN3-208ENST00000479530 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
PDZRN3-208ENST00000479530 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
PDZRN3-208ENST00000479530 SIRT1Q96EB6 747 aa16.45■□□□□ 0.22
PDZRN3-208ENST00000479530 TECPR2O15040 1411 aa16.44■□□□□ 0.22
PDZRN3-208ENST00000479530 HDGFP51858 240 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-208ENST00000479530 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
PDZRN3-208ENST00000479530 ZSCAN30Q86W11 494 aa16.44■□□□□ 0.22
PDZRN3-208ENST00000479530 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 CHAMP1Q96JM3 812 aa16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 CDC45O75419 566 aa16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 PTMSP20962 102 aa16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
PDZRN3-208ENST00000479530 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 APBB1O00213 710 aa16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 CHL1O00533 1208 aa16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 TPM2P07951 284 aa16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 PLEKHM2Q8IWE5 1019 aa16.42■□□□□ 0.22
PDZRN3-208ENST00000479530 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
PDZRN3-208ENST00000479530 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
PDZRN3-208ENST00000479530 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
PDZRN3-208ENST00000479530 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
PDZRN3-208ENST00000479530 API5Q9BZZ5 524 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 RBSNQ9H1K0 784 aa16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 AMOTL2Q9Y2J4 779 aa16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 DLG5Q8TDM6 1919 aa16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 IBTKQ9P2D0 1353 aaPredicted RBP16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 ZGPATQ8N5A5 531 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-208ENST00000479530 OFD1O75665 1012 aa16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 CYP2E1P05181 493 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 G2E3Q7L622 706 aa16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 C3P01024 1663 aa16.39■□□□□ 0.21
PDZRN3-208ENST00000479530 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 ZNF445P59923 1031 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 MEIS3Q99687 375 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 MSNP26038 577 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 ANP32BQ92688 251 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 USP6P35125 1406 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 F6X3S4 739 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 USP26Q9BXU7 913 aa16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-208ENST00000479530 RGS12O14924 1447 aa16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 RABEP1Q15276 862 aa16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
PDZRN3-208ENST00000479530 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
PDZRN3-208ENST00000479530 ZDHHC9Q9Y397 364 aa16.36■□□□□ 0.21
PDZRN3-208ENST00000479530 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
PDZRN3-208ENST00000479530 PDCL3Q9H2J4 239 aa16.36■□□□□ 0.21
PDZRN3-208ENST00000479530 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 EYA1Q99502 592 aa16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 NSFL1CQ9UNZ2 370 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 R3HCC1Q9Y3T6 440 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 PEAK1Q9H792 1746 aa16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-208ENST00000479530 NUCB2P80303 420 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 CEP85Q6P2H3 762 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 CRB1P82279 1406 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 AKAP12Q02952 1782 aa16.34■□□□□ 0.21
PDZRN3-208ENST00000479530 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.21
PDZRN3-208ENST00000479530 MSH6P52701 1360 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms