RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ISY1Q9ULR0 285 aaKnown RBP30.6■■■□□ 2.49
SYNGAP1-206ENST00000479510 TTC21AQ8NDW8 1320 aa30.6■■■□□ 2.49
SYNGAP1-206ENST00000479510 GOLGA6L3A6NEY3 463 aa30.59■■■□□ 2.49
SYNGAP1-206ENST00000479510 PEAK1Q9H792 1746 aa30.59■■■□□ 2.49
SYNGAP1-206ENST00000479510 CRB1P82279 1406 aa30.58■■■□□ 2.49
SYNGAP1-206ENST00000479510 KIF13AQ9H1H9 1805 aa30.57■■■□□ 2.48
SYNGAP1-206ENST00000479510 K7ELQ4 463 aaPredicted RBP30.56■■■□□ 2.48
SYNGAP1-206ENST00000479510 TTC22Q5TAA0 569 aa30.56■■■□□ 2.48
SYNGAP1-206ENST00000479510 GBP4Q96PP9 640 aa30.56■■■□□ 2.48
SYNGAP1-206ENST00000479510 RAB3GAP1Q15042 981 aa30.55■■■□□ 2.48
SYNGAP1-206ENST00000479510 GSPT1P15170 499 aaKnown RBP30.54■■■□□ 2.48
SYNGAP1-206ENST00000479510 CEP85Q6P2H3 762 aa30.54■■■□□ 2.48
SYNGAP1-206ENST00000479510 RTL1A6NKG5 1358 aa30.53■■■□□ 2.48
SYNGAP1-206ENST00000479510 HSP90AB2PQ58FF8 381 aa30.53■■■□□ 2.48
SYNGAP1-206ENST00000479510 KDRP35968 1356 aa30.52■■■□□ 2.48
SYNGAP1-206ENST00000479510 MCM10Q7L590 875 aa30.51■■■□□ 2.48
SYNGAP1-206ENST00000479510 SBNO1A3KN83 1393 aa30.51■■■□□ 2.47
SYNGAP1-206ENST00000479510 SKOR2Q2VWA4 1001 aaPredicted RBP30.51■■■□□ 2.47
SYNGAP1-206ENST00000479510 TNPO1Q92973 898 aaKnown RBP30.51■■■□□ 2.47
SYNGAP1-206ENST00000479510 RABEP1Q15276 862 aa30.5■■■□□ 2.47
SYNGAP1-206ENST00000479510 FLT4P35916 1363 aa30.5■■■□□ 2.47
SYNGAP1-206ENST00000479510 MSH6P52701 1360 aa30.49■■■□□ 2.47
SYNGAP1-206ENST00000479510 FMN2Q9NZ56 1722 aa30.49■■■□□ 2.47
SYNGAP1-206ENST00000479510 LTKP29376 864 aa30.49■■■□□ 2.47
SYNGAP1-206ENST00000479510 PTPRUQ92729 1446 aa30.48■■■□□ 2.47
SYNGAP1-206ENST00000479510 HMMRO75330 724 aa30.48■■■□□ 2.47
SYNGAP1-206ENST00000479510 HSP90AA1P07900 732 aaKnown RBP30.47■■■□□ 2.47
SYNGAP1-206ENST00000479510 XRCC6P12956 609 aaKnown RBP eCLIP30.47■■■□□ 2.47
SYNGAP1-206ENST00000479510 MRE11P49959 708 aa30.47■■■□□ 2.47
SYNGAP1-206ENST00000479510 KRT24Q2M2I5 525 aa30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 CASC1Q6TDU7 716 aa30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 CLEC17AQ6ZS10 378 aa30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 EID1Q9Y6B2 187 aa30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 SLIT1O75093 1534 aa30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 HTATSF1O43719 755 aaKnown RBP30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 CCT4P50991 539 aaKnown RBP30.46■■■□□ 2.47
SYNGAP1-206ENST00000479510 RTF1Q92541 710 aaKnown RBP30.45■■■□□ 2.47
SYNGAP1-206ENST00000479510 MAP3K19Q56UN5 1328 aa30.45■■■□□ 2.47
SYNGAP1-206ENST00000479510 ARHGAP23Q9P227 1491 aa30.45■■■□□ 2.46
SYNGAP1-206ENST00000479510 CD2BP2O95400 341 aaKnown RBP30.44■■■□□ 2.46
SYNGAP1-206ENST00000479510 GAS2L2Q8NHY3 880 aa30.44■■■□□ 2.46
SYNGAP1-206ENST00000479510 TBX22Q9Y458 520 aa30.44■■■□□ 2.46
SYNGAP1-206ENST00000479510 SLC4A2P04920 1241 aa30.43■■■□□ 2.46
SYNGAP1-206ENST00000479510 USP26Q9BXU7 913 aa30.43■■■□□ 2.46
SYNGAP1-206ENST00000479510 SOS1Q07889 1333 aaPredicted RBP30.43■■■□□ 2.46
SYNGAP1-206ENST00000479510 IGSF1Q8N6C5 1336 aa30.42■■■□□ 2.46
SYNGAP1-206ENST00000479510 RIMS1Q86UR5 1692 aaKnown RBP30.42■■■□□ 2.46
SYNGAP1-206ENST00000479510 DIP2AQ14689 1571 aa30.42■■■□□ 2.46
SYNGAP1-206ENST00000479510 MEIS3Q99687 375 aa30.42■■■□□ 2.46
SYNGAP1-206ENST00000479510 MTHFSDQ2M296 383 aaKnown RBP30.41■■■□□ 2.46
SYNGAP1-206ENST00000479510 GZF1Q9H116 711 aaPredicted RBP30.41■■■□□ 2.46
SYNGAP1-206ENST00000479510 OSBPL3Q9H4L5 887 aa30.4■■■□□ 2.46
SYNGAP1-206ENST00000479510 TSPYL4Q9UJ04 414 aa30.4■■■□□ 2.46
SYNGAP1-206ENST00000479510 C16orf71Q8IYS4 520 aaPredicted RBP30.38■■■□□ 2.45
SYNGAP1-206ENST00000479510 RBM42Q9BTD8 480 aaKnown RBP30.38■■■□□ 2.45
SYNGAP1-206ENST00000479510 AMOTL2Q9Y2J4 779 aa30.38■■■□□ 2.45
SYNGAP1-206ENST00000479510 LRRC37A3O60309 1634 aa30.38■■■□□ 2.45
SYNGAP1-206ENST00000479510 SDSP20132 328 aa30.37■■■□□ 2.45
SYNGAP1-206ENST00000479510 REC8O95072 547 aa30.37■■■□□ 2.45
SYNGAP1-206ENST00000479510 ANKARQ7Z5J8 1434 aa30.36■■■□□ 2.45
SYNGAP1-206ENST00000479510 GOLGA6L22H0YM25 854 aa30.35■■■□□ 2.45
SYNGAP1-206ENST00000479510 BABAM1Q9NWV8 329 aa30.35■■■□□ 2.45
SYNGAP1-206ENST00000479510 NUTM2FA1L443 756 aa30.35■■■□□ 2.45
SYNGAP1-206ENST00000479510 USP54Q70EL1 1684 aa30.34■■■□□ 2.45
SYNGAP1-206ENST00000479510 AMPHP49418 695 aa30.34■■■□□ 2.45
SYNGAP1-206ENST00000479510 SLC26A8Q96RN1 970 aa30.34■■■□□ 2.45
SYNGAP1-206ENST00000479510 STK31Q9BXU1 1019 aa30.34■■■□□ 2.45
SYNGAP1-206ENST00000479510 GRPEL1Q9HAV7 217 aa30.34■■■□□ 2.45
SYNGAP1-206ENST00000479510 NGDNQ8NEJ9 315 aaKnown RBP30.33■■■□□ 2.45
SYNGAP1-206ENST00000479510 OTUD7AQ8TE49 926 aaPredicted RBP30.33■■■□□ 2.45
SYNGAP1-206ENST00000479510 EYA1Q99502 592 aa30.33■■■□□ 2.45
SYNGAP1-206ENST00000479510 PIK3C2AO00443 1686 aa30.33■■■□□ 2.45
SYNGAP1-206ENST00000479510 GNAI2P04899 355 aa30.32■■■□□ 2.44
SYNGAP1-206ENST00000479510 NUCB2P80303 420 aa30.32■■■□□ 2.44
SYNGAP1-206ENST00000479510 CEP170BQ9Y4F5 1589 aaPredicted RBP30.32■■■□□ 2.44
SYNGAP1-206ENST00000479510 FOXO3O43524 673 aa30.32■■■□□ 2.44
SYNGAP1-206ENST00000479510 CWC22Q9HCG8 908 aaKnown RBP30.32■■■□□ 2.44
SYNGAP1-206ENST00000479510 GNAI3P08754 354 aa30.3■■■□□ 2.44
SYNGAP1-206ENST00000479510 CCDC30Q5VVM6 783 aa30.3■■■□□ 2.44
SYNGAP1-206ENST00000479510 ERC2O15083 957 aa30.29■■■□□ 2.44
SYNGAP1-206ENST00000479510 SMARCA5O60264 1052 aaPredicted RBP30.29■■■□□ 2.44
SYNGAP1-206ENST00000479510 ST18O60284 1047 aa30.29■■■□□ 2.44
SYNGAP1-206ENST00000479510 G2E3Q7L622 706 aa30.29■■■□□ 2.44
SYNGAP1-206ENST00000479510 MIS18AQ9NYP9 233 aa30.29■■■□□ 2.44
SYNGAP1-206ENST00000479510 XRN1Q8IZH2 1706 aaKnown RBP30.28■■■□□ 2.44
SYNGAP1-206ENST00000479510 IBTKQ9P2D0 1353 aaPredicted RBP30.28■■■□□ 2.44
SYNGAP1-206ENST00000479510 PDE1AP54750 535 aa30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 GNAT3A8MTJ3 354 aa30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 SOX12O15370 315 aa30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 SSFA2P28290 1259 aa30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 CACNA1FO60840 1977 aa30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 FAM208AQ9UK61 1670 aaKnown RBP30.27■■■□□ 2.44
SYNGAP1-206ENST00000479510 PXDNLA1KZ92 1463 aa30.26■■■□□ 2.44
SYNGAP1-206ENST00000479510 SLC4A10Q6U841 1118 aa30.26■■■□□ 2.43
SYNGAP1-206ENST00000479510 N4BP2Q86UW6 1770 aaPredicted RBP30.26■■■□□ 2.43
SYNGAP1-206ENST00000479510 FOXD4L1Q9NU39 408 aa30.26■■■□□ 2.43
SYNGAP1-206ENST00000479510 PANK2Q9BZ23 570 aa30.25■■■□□ 2.43
SYNGAP1-206ENST00000479510 BAG4O95429 457 aaKnown RBP30.24■■■□□ 2.43
SYNGAP1-206ENST00000479510 F6X3S4 739 aa30.24■■■□□ 2.43
SYNGAP1-206ENST00000479510 CYP2E1P05181 493 aaPredicted RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms