RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 FLIIQ13045 1269 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 INSRP06213 1382 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 BECN2A8MW95 431 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 GOLGA6L19H0YKK7 550 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 MBD3O95983 291 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
COL20A1-206ENST00000479501 MX1P20591 662 aa17.2■□□□□ 0.34
COL20A1-206ENST00000479501 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
COL20A1-206ENST00000479501 DDX54Q8TDD1 881 aaKnown RBP17.2■□□□□ 0.34
COL20A1-206ENST00000479501 KIF1BPQ96EK5 621 aa17.2■□□□□ 0.34
COL20A1-206ENST00000479501 AACSQ86V21 672 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 TTC21AQ8NDW8 1320 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
COL20A1-206ENST00000479501 RALYLQ86SE5 291 aaKnown RBP17.19■□□□□ 0.34
COL20A1-206ENST00000479501 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 ZNF592Q92610 1267 aa17.19■□□□□ 0.34
COL20A1-206ENST00000479501 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
COL20A1-206ENST00000479501 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
COL20A1-206ENST00000479501 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
COL20A1-206ENST00000479501 PTPRTO14522 1441 aa17.18■□□□□ 0.34
COL20A1-206ENST00000479501 NPATQ14207 1427 aa17.18■□□□□ 0.34
COL20A1-206ENST00000479501 C8orf34Q49A92 452 aa17.18■□□□□ 0.34
COL20A1-206ENST00000479501 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
COL20A1-206ENST00000479501 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
COL20A1-206ENST00000479501 MYO5CQ9NQX4 1742 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 ABCC1P33527 1531 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 PDCP20941 246 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 MTERF4Q7Z6M4 381 aaKnown RBP17.17■□□□□ 0.34
COL20A1-206ENST00000479501 VAMP4O75379 141 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 NUCB1Q02818 461 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
COL20A1-206ENST00000479501 MRPL50Q8N5N7 158 aaKnown RBP17.17■□□□□ 0.34
COL20A1-206ENST00000479501 ATP10AO60312 1499 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 TRIM29Q14134 588 aa17.17■□□□□ 0.34
COL20A1-206ENST00000479501 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
COL20A1-206ENST00000479501 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 TPM2P07951 284 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 ZMYM4Q5VZL5 1548 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
COL20A1-206ENST00000479501 NCKAP5LQ9HCH0 1330 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 RNF214Q8ND24 703 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 TBC1D9Q6ZT07 1266 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 VPS37DQ86XT2 251 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
COL20A1-206ENST00000479501 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 KDM5CP41229 1560 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 KIF6Q6ZMV9 814 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
COL20A1-206ENST00000479501 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 FOSBP53539 338 aa17.15■□□□□ 0.34
COL20A1-206ENST00000479501 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
COL20A1-206ENST00000479501 NFXL1Q6ZNB6 911 aa17.14■□□□□ 0.33
COL20A1-206ENST00000479501 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
COL20A1-206ENST00000479501 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
COL20A1-206ENST00000479501 MEIS3Q99687 375 aa17.13■□□□□ 0.33
COL20A1-206ENST00000479501 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
COL20A1-206ENST00000479501 FIBPO43427 364 aa17.13■□□□□ 0.33
COL20A1-206ENST00000479501 CCAR2Q8N163 923 aaKnown RBP17.13■□□□□ 0.33
COL20A1-206ENST00000479501 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
COL20A1-206ENST00000479501 CCDC73Q6ZRK6 1079 aa17.12■□□□□ 0.33
COL20A1-206ENST00000479501 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
COL20A1-206ENST00000479501 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
COL20A1-206ENST00000479501 G3V3G9 751 aa17.12■□□□□ 0.33
COL20A1-206ENST00000479501 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
COL20A1-206ENST00000479501 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
COL20A1-206ENST00000479501 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
COL20A1-206ENST00000479501 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
COL20A1-206ENST00000479501 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
COL20A1-206ENST00000479501 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
COL20A1-206ENST00000479501 BLOC1S2Q6QNY1 142 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
COL20A1-206ENST00000479501 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 TPM3P06753 285 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 ANKRD1Q15327 319 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
COL20A1-206ENST00000479501 CCDC57Q2TAC2 916 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 ERICH2A1L162 156 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
COL20A1-206ENST00000479501 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
COL20A1-206ENST00000479501 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
COL20A1-206ENST00000479501 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
COL20A1-206ENST00000479501 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms