RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 TNS2Q63HR2 1409 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 SBNO2Q9Y2G9 1366 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 TUBGCP6Q96RT7 1819 aa10.88□□□□□ -0.67
HMGCL-205ENST00000479458 PNPLA7Q6ZV29 1317 aa10.88□□□□□ -0.67
HMGCL-205ENST00000479458 TOMM70O94826 608 aa10.88□□□□□ -0.67
HMGCL-205ENST00000479458 LRRC4BQ9NT99 713 aa10.88□□□□□ -0.67
HMGCL-205ENST00000479458 ABCC6O95255 1503 aa10.88□□□□□ -0.67
HMGCL-205ENST00000479458 USP6P35125 1406 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
HMGCL-205ENST00000479458 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 CD2APQ9Y5K6 639 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 CCDC7Q96M83 1385 aa10.87□□□□□ -0.67
HMGCL-205ENST00000479458 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
HMGCL-205ENST00000479458 PPIP5K1Q6PFW1 1433 aa10.85□□□□□ -0.67
HMGCL-205ENST00000479458 AXIN2Q9Y2T1 843 aa10.84□□□□□ -0.67
HMGCL-205ENST00000479458 USP47Q96K76 1375 aa10.84□□□□□ -0.67
HMGCL-205ENST00000479458 RGPD5Q99666 1765 aa10.84□□□□□ -0.67
HMGCL-205ENST00000479458 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-205ENST00000479458 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-205ENST00000479458 TESK2Q96S53 571 aa10.83□□□□□ -0.68
HMGCL-205ENST00000479458 LY75O60449 1722 aa10.83□□□□□ -0.68
HMGCL-205ENST00000479458 CPSF1Q10570 1443 aaKnown RBP10.83□□□□□ -0.68
HMGCL-205ENST00000479458 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
HMGCL-205ENST00000479458 ARHGEF25Q86VW2 580 aa10.82□□□□□ -0.68
HMGCL-205ENST00000479458 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
HMGCL-205ENST00000479458 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
HMGCL-205ENST00000479458 CABP1Q9NZU7 370 aa10.82□□□□□ -0.68
HMGCL-205ENST00000479458 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
HMGCL-205ENST00000479458 FSTL1Q12841 308 aa10.8□□□□□ -0.68
HMGCL-205ENST00000479458 PIK3C2AO00443 1686 aa10.79□□□□□ -0.68
HMGCL-205ENST00000479458 NLRP6P59044 892 aa10.79□□□□□ -0.68
HMGCL-205ENST00000479458 KCNH5Q8NCM2 988 aa10.79□□□□□ -0.68
HMGCL-205ENST00000479458 ACSBG1Q96GR2 724 aa10.79□□□□□ -0.68
HMGCL-205ENST00000479458 PUS7Q96PZ0 661 aaKnown RBP10.79□□□□□ -0.68
HMGCL-205ENST00000479458 WWC3Q9ULE0 1092 aa10.79□□□□□ -0.68
HMGCL-205ENST00000479458 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
HMGCL-205ENST00000479458 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.68
HMGCL-205ENST00000479458 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
HMGCL-205ENST00000479458 COL23A1Q86Y22 540 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-205ENST00000479458 MON2Q7Z3U7 1717 aa10.77□□□□□ -0.69
HMGCL-205ENST00000479458 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
HMGCL-205ENST00000479458 IL2RBP14784 551 aa10.76□□□□□ -0.69
HMGCL-205ENST00000479458 TMF1P82094 1093 aa10.76□□□□□ -0.69
HMGCL-205ENST00000479458 FLAD1Q8NFF5 587 aa10.76□□□□□ -0.69
HMGCL-205ENST00000479458 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-205ENST00000479458 SLC12A5Q9H2X9 1139 aa10.75□□□□□ -0.69
HMGCL-205ENST00000479458 TTC21BQ7Z4L5 1316 aa10.75□□□□□ -0.69
HMGCL-205ENST00000479458 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
HMGCL-205ENST00000479458 NFAT5O94916 1531 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 TMC1Q8TDI8 760 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 IGSF1Q8N6C5 1336 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 A0A1W2PP64 1363 aa10.74□□□□□ -0.69
HMGCL-205ENST00000479458 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
HMGCL-205ENST00000479458 ERBB3P21860 1342 aa10.73□□□□□ -0.69
HMGCL-205ENST00000479458 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
HMGCL-205ENST00000479458 KIF13BQ9NQT8 1826 aa10.72□□□□□ -0.69
HMGCL-205ENST00000479458 HSPA1AP0DMV8 641 aaKnown RBP10.72□□□□□ -0.69
HMGCL-205ENST00000479458 HSPA1BP0DMV9 641 aaKnown RBP10.72□□□□□ -0.69
HMGCL-205ENST00000479458 HSPA5P11021 654 aaKnown RBP10.72□□□□□ -0.69
HMGCL-205ENST00000479458 CDCA8Q53HL2 280 aa10.72□□□□□ -0.69
HMGCL-205ENST00000479458 HDGFL2Q7Z4V5 671 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-205ENST00000479458 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
HMGCL-205ENST00000479458 EDC4Q6P2E9 1401 aaKnown RBP10.72□□□□□ -0.69
HMGCL-205ENST00000479458 USP54Q70EL1 1684 aa10.72□□□□□ -0.69
HMGCL-205ENST00000479458 NSD2O96028 1365 aa10.71□□□□□ -0.69
HMGCL-205ENST00000479458 FKBP8Q14318 412 aa10.71□□□□□ -0.69
HMGCL-205ENST00000479458 TAF1LQ8IZX4 1826 aa10.71□□□□□ -0.69
HMGCL-205ENST00000479458 PLEKHG2Q9H7P9 1386 aa10.71□□□□□ -0.69
HMGCL-205ENST00000479458 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
HMGCL-205ENST00000479458 C5P01031 1676 aa10.7□□□□□ -0.7
HMGCL-205ENST00000479458 USP31Q70CQ4 1352 aa10.7□□□□□ -0.7
HMGCL-205ENST00000479458 HTRA3P83110 453 aa10.7□□□□□ -0.7
HMGCL-205ENST00000479458 C16orf71Q8IYS4 520 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-205ENST00000479458 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-205ENST00000479458 PXDNLA1KZ92 1463 aa10.69□□□□□ -0.7
HMGCL-205ENST00000479458 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
HMGCL-205ENST00000479458 NME9Q86XW9 330 aa10.69□□□□□ -0.7
HMGCL-205ENST00000479458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGCL-205ENST00000479458 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
HMGCL-205ENST00000479458 PRIM1P49642 420 aaKnown RBP10.68□□□□□ -0.7
HMGCL-205ENST00000479458 KCNQ4P56696 695 aa10.68□□□□□ -0.7
HMGCL-205ENST00000479458 TNRC6CQ9HCJ0 1690 aaKnown RBP10.68□□□□□ -0.7
HMGCL-205ENST00000479458 FAM208AQ9UK61 1670 aaKnown RBP10.68□□□□□ -0.7
HMGCL-205ENST00000479458 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 KIAA1551Q9HCM1 1747 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 NLRP2Q9NX02 1062 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 BRCA1P38398 1863 aaKnown RBP10.67□□□□□ -0.7
HMGCL-205ENST00000479458 UBR3Q6ZT12 1888 aa10.67□□□□□ -0.7
HMGCL-205ENST00000479458 KDM2BQ8NHM5 1336 aa10.66□□□□□ -0.7
HMGCL-205ENST00000479458 ARFGEF1Q9Y6D6 1849 aa10.66□□□□□ -0.7
HMGCL-205ENST00000479458 TGFB2P61812 414 aa10.66□□□□□ -0.7
HMGCL-205ENST00000479458 PKD1L3Q7Z443 1732 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms