RNA–Protein interactions for RNA: ENST00000479317.1

RRP12-206, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-206ENST00000479317 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
RRP12-206ENST00000479317 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
RRP12-206ENST00000479317 MTHFSP49914 203 aa13.78□□□□□ -0.2
RRP12-206ENST00000479317 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
RRP12-206ENST00000479317 FAM208AQ9UK61 1670 aaKnown RBP13.78□□□□□ -0.2
RRP12-206ENST00000479317 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
RRP12-206ENST00000479317 PROM2Q8N271 834 aa13.77□□□□□ -0.21
RRP12-206ENST00000479317 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
RRP12-206ENST00000479317 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
RRP12-206ENST00000479317 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
RRP12-206ENST00000479317 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
RRP12-206ENST00000479317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
RRP12-206ENST00000479317 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
RRP12-206ENST00000479317 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
RRP12-206ENST00000479317 CYP27B1O15528 508 aa13.75□□□□□ -0.21
RRP12-206ENST00000479317 IL13P35225 146 aa13.74□□□□□ -0.21
RRP12-206ENST00000479317 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
RRP12-206ENST00000479317 MAP2P11137 1827 aaKnown RBP13.73□□□□□ -0.21
RRP12-206ENST00000479317 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
RRP12-206ENST00000479317 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
RRP12-206ENST00000479317 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
RRP12-206ENST00000479317 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
RRP12-206ENST00000479317 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
RRP12-206ENST00000479317 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
RRP12-206ENST00000479317 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
RRP12-206ENST00000479317 MPRIPQ6WCQ1 1025 aa13.71□□□□□ -0.21
RRP12-206ENST00000479317 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.21
RRP12-206ENST00000479317 PHKG2P15735 406 aa13.7□□□□□ -0.22
RRP12-206ENST00000479317 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
RRP12-206ENST00000479317 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
RRP12-206ENST00000479317 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
RRP12-206ENST00000479317 STK32BQ9NY57 414 aa13.7□□□□□ -0.22
RRP12-206ENST00000479317 SBF2Q86WG5 1849 aa13.69□□□□□ -0.22
RRP12-206ENST00000479317 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
RRP12-206ENST00000479317 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
RRP12-206ENST00000479317 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
RRP12-206ENST00000479317 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
RRP12-206ENST00000479317 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
RRP12-206ENST00000479317 LRRC4BQ9NT99 713 aa13.68□□□□□ -0.22
RRP12-206ENST00000479317 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
RRP12-206ENST00000479317 SRCAPQ6ZRS2 3230 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 HMOX1P09601 288 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 KCNQ4P56696 695 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 PIGBQ92521 554 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
RRP12-206ENST00000479317 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
RRP12-206ENST00000479317 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
RRP12-206ENST00000479317 DDX10Q13206 875 aaKnown RBP13.66□□□□□ -0.22
RRP12-206ENST00000479317 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
RRP12-206ENST00000479317 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
RRP12-206ENST00000479317 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
RRP12-206ENST00000479317 KDRP35968 1356 aa13.66□□□□□ -0.22
RRP12-206ENST00000479317 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
RRP12-206ENST00000479317 RREB1Q92766 1687 aa13.65□□□□□ -0.22
RRP12-206ENST00000479317 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
RRP12-206ENST00000479317 SPON1Q9HCB6 807 aa13.64□□□□□ -0.23
RRP12-206ENST00000479317 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
RRP12-206ENST00000479317 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
RRP12-206ENST00000479317 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
RRP12-206ENST00000479317 CABP4P57796 275 aa13.63□□□□□ -0.23
RRP12-206ENST00000479317 ZNF827Q17R98 1081 aa13.63□□□□□ -0.23
RRP12-206ENST00000479317 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
RRP12-206ENST00000479317 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
RRP12-206ENST00000479317 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
RRP12-206ENST00000479317 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
RRP12-206ENST00000479317 SHANK3Q9BYB0 1731 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 BTAF1O14981 1849 aa13.62□□□□□ -0.23
RRP12-206ENST00000479317 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
RRP12-206ENST00000479317 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
RRP12-206ENST00000479317 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
RRP12-206ENST00000479317 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
RRP12-206ENST00000479317 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
RRP12-206ENST00000479317 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
RRP12-206ENST00000479317 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
RRP12-206ENST00000479317 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
RRP12-206ENST00000479317 SIK1P57059 783 aa13.59□□□□□ -0.23
RRP12-206ENST00000479317 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
RRP12-206ENST00000479317 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
RRP12-206ENST00000479317 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
RRP12-206ENST00000479317 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
RRP12-206ENST00000479317 RALBP1Q15311 655 aa13.58□□□□□ -0.24
RRP12-206ENST00000479317 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
RRP12-206ENST00000479317 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
RRP12-206ENST00000479317 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
RRP12-206ENST00000479317 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
RRP12-206ENST00000479317 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
RRP12-206ENST00000479317 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
RRP12-206ENST00000479317 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
RRP12-206ENST00000479317 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
RRP12-206ENST00000479317 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
RRP12-206ENST00000479317 MSH5O43196 834 aa13.56□□□□□ -0.24
RRP12-206ENST00000479317 FCHSD2O94868 740 aa13.56□□□□□ -0.24
RRP12-206ENST00000479317 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
RRP12-206ENST00000479317 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms