RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
ITCH-204ENST00000479215 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
ITCH-204ENST00000479215 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
ITCH-204ENST00000479215 AMPHP49418 695 aa12.64□□□□□ -0.39
ITCH-204ENST00000479215 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
ITCH-204ENST00000479215 PUS7Q96PZ0 661 aaKnown RBP12.64□□□□□ -0.39
ITCH-204ENST00000479215 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
ITCH-204ENST00000479215 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
ITCH-204ENST00000479215 APLP1P51693 650 aa12.63□□□□□ -0.39
ITCH-204ENST00000479215 COG3Q96JB2 828 aa12.63□□□□□ -0.39
ITCH-204ENST00000479215 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
ITCH-204ENST00000479215 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
ITCH-204ENST00000479215 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
ITCH-204ENST00000479215 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
ITCH-204ENST00000479215 CEP350Q5VT06 3117 aa12.61□□□□□ -0.39
ITCH-204ENST00000479215 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
ITCH-204ENST00000479215 SLC12A5Q9H2X9 1139 aa12.61□□□□□ -0.39
ITCH-204ENST00000479215 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
ITCH-204ENST00000479215 ADCY9O60503 1353 aa12.6□□□□□ -0.39
ITCH-204ENST00000479215 HOXC9P31274 260 aa12.6□□□□□ -0.39
ITCH-204ENST00000479215 AK7Q96M32 723 aa12.6□□□□□ -0.39
ITCH-204ENST00000479215 NSD2O96028 1365 aa12.59□□□□□ -0.39
ITCH-204ENST00000479215 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
ITCH-204ENST00000479215 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
ITCH-204ENST00000479215 TOMM70O94826 608 aa12.58□□□□□ -0.4
ITCH-204ENST00000479215 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
ITCH-204ENST00000479215 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
ITCH-204ENST00000479215 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
ITCH-204ENST00000479215 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
ITCH-204ENST00000479215 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
ITCH-204ENST00000479215 MON2Q7Z3U7 1717 aa12.57□□□□□ -0.4
ITCH-204ENST00000479215 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
ITCH-204ENST00000479215 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
ITCH-204ENST00000479215 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
ITCH-204ENST00000479215 LTN1O94822 1766 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 KIF3CO14782 793 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 SSFA2P28290 1259 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
ITCH-204ENST00000479215 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
ITCH-204ENST00000479215 LY75O60449 1722 aa12.55□□□□□ -0.4
ITCH-204ENST00000479215 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
ITCH-204ENST00000479215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
ITCH-204ENST00000479215 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
ITCH-204ENST00000479215 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
ITCH-204ENST00000479215 PHF14O94880 888 aa12.53□□□□□ -0.4
ITCH-204ENST00000479215 TGFB2P61812 414 aa12.53□□□□□ -0.4
ITCH-204ENST00000479215 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
ITCH-204ENST00000479215 MEGF6O75095 1541 aa12.52□□□□□ -0.4
ITCH-204ENST00000479215 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
ITCH-204ENST00000479215 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
ITCH-204ENST00000479215 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
ITCH-204ENST00000479215 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
ITCH-204ENST00000479215 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
ITCH-204ENST00000479215 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
ITCH-204ENST00000479215 SIK1P57059 783 aa12.5□□□□□ -0.41
ITCH-204ENST00000479215 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
ITCH-204ENST00000479215 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
ITCH-204ENST00000479215 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
ITCH-204ENST00000479215 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
ITCH-204ENST00000479215 FSTL1Q12841 308 aa12.49□□□□□ -0.41
ITCH-204ENST00000479215 RRS1Q15050 365 aaKnown RBP12.49□□□□□ -0.41
ITCH-204ENST00000479215 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
ITCH-204ENST00000479215 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
ITCH-204ENST00000479215 BCS1LQ9Y276 419 aa12.49□□□□□ -0.41
ITCH-204ENST00000479215 INSRP06213 1382 aa12.48□□□□□ -0.41
ITCH-204ENST00000479215 CYP27B1O15528 508 aa12.48□□□□□ -0.41
ITCH-204ENST00000479215 MMP10P09238 476 aa12.48□□□□□ -0.41
ITCH-204ENST00000479215 FBLN1P23142 703 aa12.48□□□□□ -0.41
ITCH-204ENST00000479215 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
ITCH-204ENST00000479215 PIGBQ92521 554 aa12.48□□□□□ -0.41
ITCH-204ENST00000479215 KDM2BQ8NHM5 1336 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 FYB1O15117 783 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 GNPATO15228 680 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 TMF1P82094 1093 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.41
ITCH-204ENST00000479215 TMOD3Q9NYL9 352 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
ITCH-204ENST00000479215 C5P01031 1676 aa12.47□□□□□ -0.41
ITCH-204ENST00000479215 FLT4P35916 1363 aa12.46□□□□□ -0.41
ITCH-204ENST00000479215 ADRA2BP18089 450 aa12.46□□□□□ -0.41
ITCH-204ENST00000479215 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
ITCH-204ENST00000479215 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
ITCH-204ENST00000479215 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
ITCH-204ENST00000479215 FCHSD2O94868 740 aa12.45□□□□□ -0.42
ITCH-204ENST00000479215 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
ITCH-204ENST00000479215 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
ITCH-204ENST00000479215 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
ITCH-204ENST00000479215 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms