RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ANKRD62A6NC57 917 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
RC3H1-204ENST00000479099 NR3C2P08235 984 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 NPAS3Q8IXF0 933 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
RC3H1-204ENST00000479099 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 SIRT1Q96EB6 747 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
RC3H1-204ENST00000479099 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
RC3H1-204ENST00000479099 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
RC3H1-204ENST00000479099 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
RC3H1-204ENST00000479099 DNAJC14Q6Y2X3 702 aaPredicted RBP8.37□□□□□ -1.07
RC3H1-204ENST00000479099 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
RC3H1-204ENST00000479099 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
RC3H1-204ENST00000479099 INSM1Q01101 510 aaPredicted RBP8.36□□□□□ -1.07
RC3H1-204ENST00000479099 PPP2R2DQ66LE6 453 aa8.36□□□□□ -1.07
RC3H1-204ENST00000479099 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
RC3H1-204ENST00000479099 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
RC3H1-204ENST00000479099 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
RC3H1-204ENST00000479099 TMEM88BA6NKF7 163 aa8.35□□□□□ -1.07
RC3H1-204ENST00000479099 FSHRP23945 695 aa8.35□□□□□ -1.07
RC3H1-204ENST00000479099 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
RC3H1-204ENST00000479099 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
RC3H1-204ENST00000479099 RFX1P22670 979 aa8.34□□□□□ -1.07
RC3H1-204ENST00000479099 RFC5P40937 340 aa8.34□□□□□ -1.07
RC3H1-204ENST00000479099 FBXO31Q5XUX0 539 aaPredicted RBP8.34□□□□□ -1.07
RC3H1-204ENST00000479099 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
RC3H1-204ENST00000479099 NOL8Q76FK4 1167 aaKnown RBP8.34□□□□□ -1.07
RC3H1-204ENST00000479099 LRRN4Q8WUT4 740 aa8.34□□□□□ -1.07
RC3H1-204ENST00000479099 FKBPLQ9UIM3 349 aa8.34□□□□□ -1.07
RC3H1-204ENST00000479099 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
RC3H1-204ENST00000479099 ERFEQ4G0M1 354 aa8.33□□□□□ -1.08
RC3H1-204ENST00000479099 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
RC3H1-204ENST00000479099 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
RC3H1-204ENST00000479099 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
RC3H1-204ENST00000479099 PLEKHD1A6NEE1 506 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 H3BM21 787 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 SOCS7O14512 581 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 SF3A1Q15459 793 aaKnown RBP8.32□□□□□ -1.08
RC3H1-204ENST00000479099 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 IRF7Q92985 503 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 ARHGAP9Q9BRR9 750 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 STK17AQ9UEE5 414 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
RC3H1-204ENST00000479099 UPP2O95045 317 aa8.31□□□□□ -1.08
RC3H1-204ENST00000479099 ABL2P42684 1182 aa8.31□□□□□ -1.08
RC3H1-204ENST00000479099 NR6A1Q15406 480 aa8.31□□□□□ -1.08
RC3H1-204ENST00000479099 B4GALNT3Q6L9W6 998 aa8.31□□□□□ -1.08
RC3H1-204ENST00000479099 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
RC3H1-204ENST00000479099 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
RC3H1-204ENST00000479099 AP1G2O75843 785 aa8.3□□□□□ -1.08
RC3H1-204ENST00000479099 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
RC3H1-204ENST00000479099 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
RC3H1-204ENST00000479099 BCL2L13Q9BXK5 485 aa8.3□□□□□ -1.08
RC3H1-204ENST00000479099 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
RC3H1-204ENST00000479099 MARCH6O60337 910 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 BMP2P12643 396 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 VAMP1P23763 118 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 VEGFBP49765 207 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 HDGFL1Q5TGJ6 251 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 PRDM16Q9HAZ2 1276 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
RC3H1-204ENST00000479099 LOC102724159A0A0B4J2E5 919 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 SOBPA7XYQ1 873 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 ATG7O95352 703 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 GMPRP36959 345 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 PTK2Q05397 1052 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 PWP2Q15269 919 aaKnown RBP8.28□□□□□ -1.08
RC3H1-204ENST00000479099 GIMAP6Q6P9H5 292 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 ZBTB33Q86T24 672 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
RC3H1-204ENST00000479099 ADAMTS19Q8TE59 1207 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 RIPOR2Q9Y4F9 1068 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
RC3H1-204ENST00000479099 MAN1A2O60476 641 aa8.27□□□□□ -1.09
RC3H1-204ENST00000479099 NAALADL2Q58DX5 795 aa8.27□□□□□ -1.09
RC3H1-204ENST00000479099 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
RC3H1-204ENST00000479099 TSEN34Q9BSV6 310 aaKnown RBP8.27□□□□□ -1.09
RC3H1-204ENST00000479099 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
RC3H1-204ENST00000479099 PPP1R1BQ9UD71 204 aaPredicted RBP8.27□□□□□ -1.09
RC3H1-204ENST00000479099 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
RC3H1-204ENST00000479099 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
RC3H1-204ENST00000479099 ZNF526Q8TF50 670 aaPredicted RBP8.26□□□□□ -1.09
RC3H1-204ENST00000479099 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
RC3H1-204ENST00000479099 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
RC3H1-204ENST00000479099 ERBB4Q15303 1308 aa8.26□□□□□ -1.09
RC3H1-204ENST00000479099 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
RC3H1-204ENST00000479099 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
RC3H1-204ENST00000479099 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
RC3H1-204ENST00000479099 OCSTAMPQ9BR26 566 aa8.25□□□□□ -1.09
RC3H1-204ENST00000479099 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
RC3H1-204ENST00000479099 Q6ZVU0 165 aa8.24□□□□□ -1.09
RC3H1-204ENST00000479099 EPS8L1Q8TE68 723 aa8.24□□□□□ -1.09
RC3H1-204ENST00000479099 HMX1Q9NP08 348 aaPredicted RBP8.24□□□□□ -1.09
RC3H1-204ENST00000479099 VSIG8P0DPA2 414 aa8.23□□□□□ -1.09
RC3H1-204ENST00000479099 ZNF662Q6ZS27 426 aa8.23□□□□□ -1.09
RC3H1-204ENST00000479099 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms