RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 SENP3-EIF4A1A0A087X0R7 540 aa17.36■□□□□ 0.37
AGRN-207ENST00000478677 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
AGRN-207ENST00000478677 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
AGRN-207ENST00000478677 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
AGRN-207ENST00000478677 HOXC9P31274 260 aa17.35■□□□□ 0.37
AGRN-207ENST00000478677 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
AGRN-207ENST00000478677 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.37
AGRN-207ENST00000478677 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
AGRN-207ENST00000478677 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
AGRN-207ENST00000478677 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
AGRN-207ENST00000478677 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
AGRN-207ENST00000478677 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
AGRN-207ENST00000478677 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
AGRN-207ENST00000478677 PKD1L3Q7Z443 1732 aa17.32■□□□□ 0.36
AGRN-207ENST00000478677 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
AGRN-207ENST00000478677 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
AGRN-207ENST00000478677 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
AGRN-207ENST00000478677 ITGB4P16144 1822 aa17.29■□□□□ 0.36
AGRN-207ENST00000478677 GPR162Q16538 588 aa17.29■□□□□ 0.36
AGRN-207ENST00000478677 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
AGRN-207ENST00000478677 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
AGRN-207ENST00000478677 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
AGRN-207ENST00000478677 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
AGRN-207ENST00000478677 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
AGRN-207ENST00000478677 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
AGRN-207ENST00000478677 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
AGRN-207ENST00000478677 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
AGRN-207ENST00000478677 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
AGRN-207ENST00000478677 TFCP2L1Q9NZI6 479 aa17.27■□□□□ 0.36
AGRN-207ENST00000478677 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
AGRN-207ENST00000478677 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
AGRN-207ENST00000478677 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
AGRN-207ENST00000478677 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
AGRN-207ENST00000478677 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
AGRN-207ENST00000478677 FYB1O15117 783 aa17.25■□□□□ 0.35
AGRN-207ENST00000478677 CYP27B1O15528 508 aa17.25■□□□□ 0.35
AGRN-207ENST00000478677 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
AGRN-207ENST00000478677 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
AGRN-207ENST00000478677 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
AGRN-207ENST00000478677 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
AGRN-207ENST00000478677 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
AGRN-207ENST00000478677 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
AGRN-207ENST00000478677 POLD1P28340 1107 aa17.22■□□□□ 0.35
AGRN-207ENST00000478677 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
AGRN-207ENST00000478677 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
AGRN-207ENST00000478677 INSRP06213 1382 aa17.21■□□□□ 0.35
AGRN-207ENST00000478677 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
AGRN-207ENST00000478677 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.35
AGRN-207ENST00000478677 USP47Q96K76 1375 aa17.2■□□□□ 0.34
AGRN-207ENST00000478677 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
AGRN-207ENST00000478677 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
AGRN-207ENST00000478677 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
AGRN-207ENST00000478677 COG3Q96JB2 828 aa17.18■□□□□ 0.34
AGRN-207ENST00000478677 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
AGRN-207ENST00000478677 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
AGRN-207ENST00000478677 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
AGRN-207ENST00000478677 LINC00116Q8NCU8 138 aa17.16■□□□□ 0.34
AGRN-207ENST00000478677 PIGBQ92521 554 aa17.16■□□□□ 0.34
AGRN-207ENST00000478677 KDRP35968 1356 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 KIF3CO14782 793 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 AMPHP49418 695 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 ITPK1Q13572 414 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
AGRN-207ENST00000478677 FLT4P35916 1363 aa17.15■□□□□ 0.34
AGRN-207ENST00000478677 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
AGRN-207ENST00000478677 GRIN3BO60391 1043 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 PCNTO95613 3336 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
AGRN-207ENST00000478677 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
AGRN-207ENST00000478677 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
AGRN-207ENST00000478677 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
AGRN-207ENST00000478677 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
AGRN-207ENST00000478677 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
AGRN-207ENST00000478677 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
AGRN-207ENST00000478677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
AGRN-207ENST00000478677 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
AGRN-207ENST00000478677 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
AGRN-207ENST00000478677 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
AGRN-207ENST00000478677 HSPA6P17066 643 aa17.1■□□□□ 0.33
AGRN-207ENST00000478677 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
AGRN-207ENST00000478677 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
AGRN-207ENST00000478677 MSH5O43196 834 aa17.08■□□□□ 0.32
AGRN-207ENST00000478677 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
AGRN-207ENST00000478677 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
AGRN-207ENST00000478677 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
AGRN-207ENST00000478677 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
AGRN-207ENST00000478677 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
AGRN-207ENST00000478677 SIK1P57059 783 aa17.07■□□□□ 0.32
AGRN-207ENST00000478677 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
AGRN-207ENST00000478677 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
AGRN-207ENST00000478677 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
AGRN-207ENST00000478677 EYA1Q99502 592 aa17.06■□□□□ 0.32
AGRN-207ENST00000478677 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
AGRN-207ENST00000478677 PHF14O94880 888 aa17.05■□□□□ 0.32
AGRN-207ENST00000478677 SSFA2P28290 1259 aa17.05■□□□□ 0.32
AGRN-207ENST00000478677 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms