RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 ZBTB7AO95365 584 aa30.53■■■□□ 2.48
MCF2L2-210ENST00000478652 PPP1R1BQ9UD71 204 aaPredicted RBP30.53■■■□□ 2.48
MCF2L2-210ENST00000478652 HSP90AB2PQ58FF8 381 aa30.52■■■□□ 2.48
MCF2L2-210ENST00000478652 QSER1Q2KHR3 1735 aa30.52■■■□□ 2.48
MCF2L2-210ENST00000478652 SMG6Q86US8 1419 aaKnown RBP30.51■■■□□ 2.47
MCF2L2-210ENST00000478652 INSRP06213 1382 aa30.51■■■□□ 2.47
MCF2L2-210ENST00000478652 FLT4P35916 1363 aa30.51■■■□□ 2.47
MCF2L2-210ENST00000478652 LRRC4BQ9NT99 713 aa30.5■■■□□ 2.47
MCF2L2-210ENST00000478652 ZCRB1Q8TBF4 217 aaKnown RBP30.49■■■□□ 2.47
MCF2L2-210ENST00000478652 NSD2O96028 1365 aa30.49■■■□□ 2.47
MCF2L2-210ENST00000478652 EMILIN1Q9Y6C2 1016 aa30.48■■■□□ 2.47
MCF2L2-210ENST00000478652 PKD1L3Q7Z443 1732 aa30.47■■■□□ 2.47
MCF2L2-210ENST00000478652 ZNF827Q17R98 1081 aa30.47■■■□□ 2.47
MCF2L2-210ENST00000478652 KIF24Q5T7B8 1368 aa30.46■■■□□ 2.47
MCF2L2-210ENST00000478652 PTGER2P43116 358 aa30.46■■■□□ 2.47
MCF2L2-210ENST00000478652 ATF5Q9Y2D1 282 aaPredicted RBP30.46■■■□□ 2.47
MCF2L2-210ENST00000478652 TOGARAM1Q9Y4F4 1720 aa30.46■■■□□ 2.47
MCF2L2-210ENST00000478652 ITGB4P16144 1822 aa30.45■■■□□ 2.47
MCF2L2-210ENST00000478652 PRIM1P49642 420 aaKnown RBP30.45■■■□□ 2.47
MCF2L2-210ENST00000478652 SYTL4Q96C24 671 aaPredicted RBP30.45■■■□□ 2.47
MCF2L2-210ENST00000478652 POLR3GLQ9BT43 218 aa30.44■■■□□ 2.46
MCF2L2-210ENST00000478652 KCNQ4P56696 695 aa30.41■■■□□ 2.46
MCF2L2-210ENST00000478652 RAPGEF4Q8WZA2 1011 aa30.41■■■□□ 2.46
MCF2L2-210ENST00000478652 CGNL1Q0VF96 1302 aa30.4■■■□□ 2.46
MCF2L2-210ENST00000478652 COL24A1Q17RW2 1714 aa30.39■■■□□ 2.46
MCF2L2-210ENST00000478652 HSPA5P11021 654 aaKnown RBP30.39■■■□□ 2.46
MCF2L2-210ENST00000478652 NCAPD2Q15021 1401 aa30.39■■■□□ 2.45
MCF2L2-210ENST00000478652 TAF1LQ8IZX4 1826 aa30.38■■■□□ 2.45
MCF2L2-210ENST00000478652 TATP17735 454 aaPredicted RBP30.38■■■□□ 2.45
MCF2L2-210ENST00000478652 CCER1Q8TC90 406 aaPredicted RBP30.38■■■□□ 2.45
MCF2L2-210ENST00000478652 MTFR1LQ9H019 292 aa30.38■■■□□ 2.45
MCF2L2-210ENST00000478652 AKT1S1Q96B36 256 aa30.37■■■□□ 2.45
MCF2L2-210ENST00000478652 SGIP1Q9BQI5 828 aa30.37■■■□□ 2.45
MCF2L2-210ENST00000478652 PPM1GO15355 546 aaPredicted RBP30.36■■■□□ 2.45
MCF2L2-210ENST00000478652 EIF4G2P78344 907 aaKnown RBP eCLIP30.36■■■□□ 2.45
MCF2L2-210ENST00000478652 SLC27A3Q5K4L6 730 aa30.36■■■□□ 2.45
MCF2L2-210ENST00000478652 C5P01031 1676 aa30.36■■■□□ 2.45
MCF2L2-210ENST00000478652 PCDH11XQ9BZA7 1347 aa30.33■■■□□ 2.45
MCF2L2-210ENST00000478652 PCDH11YQ9BZA8 1340 aa30.33■■■□□ 2.45
MCF2L2-210ENST00000478652 CYP27B1O15528 508 aa30.32■■■□□ 2.44
MCF2L2-210ENST00000478652 WASHC2AQ641Q2 1341 aa30.31■■■□□ 2.44
MCF2L2-210ENST00000478652 POLKQ9UBT6 870 aa30.31■■■□□ 2.44
MCF2L2-210ENST00000478652 PNPLA7Q6ZV29 1317 aa30.3■■■□□ 2.44
MCF2L2-210ENST00000478652 FHDC1Q9C0D6 1143 aaPredicted RBP30.29■■■□□ 2.44
MCF2L2-210ENST00000478652 TNNT2P45379 298 aaPredicted RBP30.27■■■□□ 2.44
MCF2L2-210ENST00000478652 EYA1Q99502 592 aa30.27■■■□□ 2.44
MCF2L2-210ENST00000478652 CCNL1Q9UK58 526 aaPredicted RBP30.27■■■□□ 2.44
MCF2L2-210ENST00000478652 SYT17Q9BSW7 474 aa30.26■■■□□ 2.43
MCF2L2-210ENST00000478652 PANK3Q9H999 370 aa30.26■■■□□ 2.43
MCF2L2-210ENST00000478652 TFCP2L1Q9NZI6 479 aa30.23■■■□□ 2.43
MCF2L2-210ENST00000478652 ARXQ96QS3 562 aa30.22■■■□□ 2.43
MCF2L2-210ENST00000478652 CHD4Q14839 1912 aa30.22■■■□□ 2.43
MCF2L2-210ENST00000478652 PALLDQ8WX93 1383 aa30.21■■■□□ 2.43
MCF2L2-210ENST00000478652 YY1P25490 414 aa30.21■■■□□ 2.43
MCF2L2-210ENST00000478652 EIF4A2Q14240 407 aaKnown RBP30.21■■■□□ 2.43
MCF2L2-210ENST00000478652 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
MCF2L2-210ENST00000478652 C4BP0C0L5 1744 aa30.2■■■□□ 2.43
MCF2L2-210ENST00000478652 UBR3Q6ZT12 1888 aa30.19■■■□□ 2.42
MCF2L2-210ENST00000478652 DCAF8L1A6NGE4 600 aa30.19■■■□□ 2.42
MCF2L2-210ENST00000478652 SLC16A10Q8TF71 515 aa30.19■■■□□ 2.42
MCF2L2-210ENST00000478652 MAP3K5Q99683 1374 aa30.16■■■□□ 2.42
MCF2L2-210ENST00000478652 NKX1-1Q15270 411 aaPredicted RBP30.16■■■□□ 2.42
MCF2L2-210ENST00000478652 SPG7Q9UQ90 795 aa30.16■■■□□ 2.42
MCF2L2-210ENST00000478652 COL23A1Q86Y22 540 aaPredicted RBP30.14■■■□□ 2.42
MCF2L2-210ENST00000478652 PIGBQ92521 554 aa30.14■■■□□ 2.42
MCF2L2-210ENST00000478652 IGSF1Q8N6C5 1336 aa30.13■■■□□ 2.41
MCF2L2-210ENST00000478652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.12■■■□□ 2.41
MCF2L2-210ENST00000478652 PHKG2P15735 406 aa30.1■■■□□ 2.41
MCF2L2-210ENST00000478652 KLHL34Q8N239 644 aa30.1■■■□□ 2.41
MCF2L2-210ENST00000478652 POLD1P28340 1107 aa30.09■■■□□ 2.41
MCF2L2-210ENST00000478652 MSH5O43196 834 aa30.08■■■□□ 2.41
MCF2L2-210ENST00000478652 MORC1Q86VD1 984 aa30.08■■■□□ 2.41
MCF2L2-210ENST00000478652 IFNL2Q8IZJ0 200 aa30.07■■■□□ 2.4
MCF2L2-210ENST00000478652 SMARCC1Q92922 1105 aaPredicted RBP30.07■■■□□ 2.4
MCF2L2-210ENST00000478652 KIF7Q2M1P5 1343 aa30.06■■■□□ 2.4
MCF2L2-210ENST00000478652 MSL1Q68DK7 614 aa30.06■■■□□ 2.4
MCF2L2-210ENST00000478652 AMIGO3Q86WK7 504 aa30.06■■■□□ 2.4
MCF2L2-210ENST00000478652 VIRMAQ69YN4 1812 aaKnown RBP30.06■■■□□ 2.4
MCF2L2-210ENST00000478652 PLEKHG2Q9H7P9 1386 aa30.04■■■□□ 2.4
MCF2L2-210ENST00000478652 TMOD3Q9NYL9 352 aa30.04■■■□□ 2.4
MCF2L2-210ENST00000478652 SMIM5Q71RC9 77 aa30.03■■■□□ 2.4
MCF2L2-210ENST00000478652 ASAP1Q9ULH1 1129 aa30.03■■■□□ 2.4
MCF2L2-210ENST00000478652 KNSTRNQ9Y448 316 aa30.03■■■□□ 2.4
MCF2L2-210ENST00000478652 UTRNP46939 3433 aa30.02■■■□□ 2.4
MCF2L2-210ENST00000478652 AEBP1Q8IUX7 1158 aa30.02■■■□□ 2.4
MCF2L2-210ENST00000478652 NLGN2Q8NFZ4 835 aa30.02■■■□□ 2.4
MCF2L2-210ENST00000478652 LOC102724428A0A0B4J2F2 783 aa30.01■■■□□ 2.39
MCF2L2-210ENST00000478652 SIK1P57059 783 aa30.01■■■□□ 2.39
MCF2L2-210ENST00000478652 AMER1Q5JTC6 1135 aaPredicted RBP30.01■■■□□ 2.39
MCF2L2-210ENST00000478652 COL5A3P25940 1745 aaPredicted RBP30.01■■■□□ 2.39
MCF2L2-210ENST00000478652 KDM6AO15550 1401 aaPredicted RBP30■■■□□ 2.39
MCF2L2-210ENST00000478652 LINC00116Q8NCU8 138 aa30■■■□□ 2.39
MCF2L2-210ENST00000478652 SCN11AQ9UI33 1791 aa30■■■□□ 2.39
MCF2L2-210ENST00000478652 ZNF831Q5JPB2 1677 aa29.99■■■□□ 2.39
MCF2L2-210ENST00000478652 ITPK1Q13572 414 aa29.98■■■□□ 2.39
MCF2L2-210ENST00000478652 AK7Q96M32 723 aa29.98■■■□□ 2.39
MCF2L2-210ENST00000478652 ATG3Q9NT62 314 aa29.97■■■□□ 2.39
MCF2L2-210ENST00000478652 KDRP35968 1356 aa29.96■■■□□ 2.39
MCF2L2-210ENST00000478652 PHF14O94880 888 aa29.96■■■□□ 2.39
MCF2L2-210ENST00000478652 FLAD1Q8NFF5 587 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms