RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 CEBPAP49715 358 aaPredicted RBP9.84□□□□□ -0.83
HOXB3-209ENST00000478644 WNT7BP56706 349 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 MYT1Q01538 1121 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 PTPRNQ16849 979 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 CCDC24Q8N4L8 307 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 PRR7Q8TB68 274 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
HOXB3-209ENST00000478644 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
HOXB3-209ENST00000478644 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
HOXB3-209ENST00000478644 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
HOXB3-209ENST00000478644 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
HOXB3-209ENST00000478644 INO80Q9ULG1 1556 aaPredicted RBP9.83□□□□□ -0.84
HOXB3-209ENST00000478644 C3P01024 1663 aa9.83□□□□□ -0.84
HOXB3-209ENST00000478644 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 AVPP01185 164 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 CCNYL3P0C7X3 344 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 PTCRAQ6ISU1 281 aaPredicted RBP9.82□□□□□ -0.84
HOXB3-209ENST00000478644 GGT6Q6P531 493 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 CCDC141Q6ZP82 1450 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 PLXNC1O60486 1568 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 TIAM1Q13009 1591 aa9.82□□□□□ -0.84
HOXB3-209ENST00000478644 IQSEC2Q5JU85 1478 aa9.81□□□□□ -0.84
HOXB3-209ENST00000478644 FAM187AA6NFU0 413 aa9.81□□□□□ -0.84
HOXB3-209ENST00000478644 HRCP23327 699 aa9.81□□□□□ -0.84
HOXB3-209ENST00000478644 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
HOXB3-209ENST00000478644 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
HOXB3-209ENST00000478644 NCOA2Q15596 1464 aa9.8□□□□□ -0.84
HOXB3-209ENST00000478644 SKOR1P84550 965 aa9.8□□□□□ -0.84
HOXB3-209ENST00000478644 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
HOXB3-209ENST00000478644 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
HOXB3-209ENST00000478644 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 SNIP1Q8TAD8 396 aaKnown RBP9.79□□□□□ -0.84
HOXB3-209ENST00000478644 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 RSPH6AQ9H0K4 717 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 LIMD1Q9UGP4 676 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 ARHGEF5Q12774 1597 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 LRRC9Q6ZRR7 1453 aa9.79□□□□□ -0.84
HOXB3-209ENST00000478644 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
HOXB3-209ENST00000478644 LILRB3O75022 631 aa9.78□□□□□ -0.84
HOXB3-209ENST00000478644 KCNH2Q12809 1159 aa9.78□□□□□ -0.84
HOXB3-209ENST00000478644 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
HOXB3-209ENST00000478644 NCOA1Q15788 1441 aa9.78□□□□□ -0.84
HOXB3-209ENST00000478644 WASHC2CQ9Y4E1 1318 aa9.78□□□□□ -0.84
HOXB3-209ENST00000478644 KIF3BO15066 747 aa9.77□□□□□ -0.85
HOXB3-209ENST00000478644 CAMSAP2Q08AD1 1489 aa9.77□□□□□ -0.85
HOXB3-209ENST00000478644 ZNF644Q9H582 1327 aaPredicted RBP9.77□□□□□ -0.85
HOXB3-209ENST00000478644 STRCQ7RTU9 1775 aa9.76□□□□□ -0.85
HOXB3-209ENST00000478644 PTPRKQ15262 1439 aa9.76□□□□□ -0.85
HOXB3-209ENST00000478644 MYOM3Q5VTT5 1437 aa9.76□□□□□ -0.85
HOXB3-209ENST00000478644 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
HOXB3-209ENST00000478644 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
HOXB3-209ENST00000478644 THEMISQ8N1K5 641 aaPredicted RBP9.76□□□□□ -0.85
HOXB3-209ENST00000478644 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
HOXB3-209ENST00000478644 UNC93B1Q9H1C4 597 aa9.75□□□□□ -0.85
HOXB3-209ENST00000478644 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
HOXB3-209ENST00000478644 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
HOXB3-209ENST00000478644 ZNF142P52746 1687 aaPredicted RBP9.74□□□□□ -0.85
HOXB3-209ENST00000478644 CLTCQ00610 1675 aaKnown RBP9.74□□□□□ -0.85
HOXB3-209ENST00000478644 A2ML1A8K2U0 1454 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 SIAH2O43255 324 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 SMPD1P17405 629 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
HOXB3-209ENST00000478644 QPCTQ16769 361 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 CTC1Q2NKJ3 1217 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 MAST1Q9Y2H9 1570 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
HOXB3-209ENST00000478644 PZPP20742 1482 aa9.73□□□□□ -0.85
HOXB3-209ENST00000478644 NLRP1Q9C000 1473 aa9.73□□□□□ -0.85
HOXB3-209ENST00000478644 TTC24A2A3L6 582 aaPredicted RBP9.73□□□□□ -0.85
HOXB3-209ENST00000478644 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
HOXB3-209ENST00000478644 SH3BP2P78314 561 aa9.73□□□□□ -0.85
HOXB3-209ENST00000478644 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
HOXB3-209ENST00000478644 CEP170BQ9Y4F5 1589 aaPredicted RBP9.72□□□□□ -0.85
HOXB3-209ENST00000478644 ZNF787Q6DD87 383 aa9.72□□□□□ -0.85
HOXB3-209ENST00000478644 DDRGK1Q96HY6 314 aa9.72□□□□□ -0.85
HOXB3-209ENST00000478644 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
HOXB3-209ENST00000478644 TNRQ92752 1358 aa9.72□□□□□ -0.85
HOXB3-209ENST00000478644 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
HOXB3-209ENST00000478644 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
HOXB3-209ENST00000478644 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
HOXB3-209ENST00000478644 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.86
HOXB3-209ENST00000478644 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.86
HOXB3-209ENST00000478644 J3QL48 77 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 BAP1Q92560 729 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 SHANK2Q9UPX8 1470 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 DUOX2Q9NRD8 1548 aa9.7□□□□□ -0.86
HOXB3-209ENST00000478644 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-209ENST00000478644 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-209ENST00000478644 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
HOXB3-209ENST00000478644 KANK1Q14678 1352 aa9.69□□□□□ -0.86
HOXB3-209ENST00000478644 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-209ENST00000478644 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-209ENST00000478644 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-209ENST00000478644 MPNDQ8N594 471 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms