RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 FBLN1P23142 703 aa18.07■□□□□ 0.48
TDP2-204ENST00000478507 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
TDP2-204ENST00000478507 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
TDP2-204ENST00000478507 COG3Q96JB2 828 aa18.06■□□□□ 0.48
TDP2-204ENST00000478507 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
TDP2-204ENST00000478507 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
TDP2-204ENST00000478507 KCNQ4P56696 695 aa18.04■□□□□ 0.48
TDP2-204ENST00000478507 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
TDP2-204ENST00000478507 AMPHP49418 695 aa18.02■□□□□ 0.48
TDP2-204ENST00000478507 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
TDP2-204ENST00000478507 FYB1O15117 783 aa18.01■□□□□ 0.47
TDP2-204ENST00000478507 NBPF6Q5VWK0 638 aa18.01■□□□□ 0.47
TDP2-204ENST00000478507 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
TDP2-204ENST00000478507 NBPF4Q96M43 638 aa18.01■□□□□ 0.47
TDP2-204ENST00000478507 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
TDP2-204ENST00000478507 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
TDP2-204ENST00000478507 CGNL1Q0VF96 1302 aa17.99■□□□□ 0.47
TDP2-204ENST00000478507 POLD1P28340 1107 aa17.98■□□□□ 0.47
TDP2-204ENST00000478507 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
TDP2-204ENST00000478507 C5P01031 1676 aa17.97■□□□□ 0.47
TDP2-204ENST00000478507 GGNBP2Q9H3C7 697 aa17.97■□□□□ 0.47
TDP2-204ENST00000478507 CCNL1Q9UK58 526 aaPredicted RBP17.97■□□□□ 0.47
TDP2-204ENST00000478507 TAF1LQ8IZX4 1826 aa17.97■□□□□ 0.47
TDP2-204ENST00000478507 INSRP06213 1382 aa17.96■□□□□ 0.47
TDP2-204ENST00000478507 USP47Q96K76 1375 aa17.96■□□□□ 0.47
TDP2-204ENST00000478507 GPR162Q16538 588 aa17.96■□□□□ 0.47
TDP2-204ENST00000478507 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
TDP2-204ENST00000478507 NLGN2Q8NFZ4 835 aa17.96■□□□□ 0.47
TDP2-204ENST00000478507 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
TDP2-204ENST00000478507 COL23A1Q86Y22 540 aaPredicted RBP17.95■□□□□ 0.46
TDP2-204ENST00000478507 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
TDP2-204ENST00000478507 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
TDP2-204ENST00000478507 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
TDP2-204ENST00000478507 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
TDP2-204ENST00000478507 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
TDP2-204ENST00000478507 FLT4P35916 1363 aa17.93■□□□□ 0.46
TDP2-204ENST00000478507 C1QTNF8P60827 252 aa17.93■□□□□ 0.46
TDP2-204ENST00000478507 TMF1P82094 1093 aa17.93■□□□□ 0.46
TDP2-204ENST00000478507 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
TDP2-204ENST00000478507 ITGB4P16144 1822 aa17.93■□□□□ 0.46
TDP2-204ENST00000478507 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
TDP2-204ENST00000478507 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
TDP2-204ENST00000478507 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
TDP2-204ENST00000478507 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
TDP2-204ENST00000478507 CYP27B1O15528 508 aa17.91■□□□□ 0.46
TDP2-204ENST00000478507 YBX3P16989 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
TDP2-204ENST00000478507 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
TDP2-204ENST00000478507 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
TDP2-204ENST00000478507 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
TDP2-204ENST00000478507 CEP350Q5VT06 3117 aa17.89■□□□□ 0.45
TDP2-204ENST00000478507 C4BP0C0L5 1744 aa17.89■□□□□ 0.45
TDP2-204ENST00000478507 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
TDP2-204ENST00000478507 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
TDP2-204ENST00000478507 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
TDP2-204ENST00000478507 AMIGO3Q86WK7 504 aa17.87■□□□□ 0.45
TDP2-204ENST00000478507 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
TDP2-204ENST00000478507 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
TDP2-204ENST00000478507 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
TDP2-204ENST00000478507 MSH5O43196 834 aa17.85■□□□□ 0.45
TDP2-204ENST00000478507 GRIN3BO60391 1043 aa17.85■□□□□ 0.45
TDP2-204ENST00000478507 NKX1-1Q15270 411 aaPredicted RBP17.85■□□□□ 0.45
TDP2-204ENST00000478507 CDCA8Q53HL2 280 aa17.85■□□□□ 0.45
TDP2-204ENST00000478507 MPRIPQ6WCQ1 1025 aa17.85■□□□□ 0.45
TDP2-204ENST00000478507 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
TDP2-204ENST00000478507 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
TDP2-204ENST00000478507 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
TDP2-204ENST00000478507 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
TDP2-204ENST00000478507 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
TDP2-204ENST00000478507 PIGBQ92521 554 aa17.83■□□□□ 0.44
TDP2-204ENST00000478507 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
TDP2-204ENST00000478507 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
TDP2-204ENST00000478507 ADCY9O60503 1353 aa17.8■□□□□ 0.44
TDP2-204ENST00000478507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.8■□□□□ 0.441e-7■■□□□ 13.6
TDP2-204ENST00000478507 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
TDP2-204ENST00000478507 EYA1Q99502 592 aa17.79■□□□□ 0.44
TDP2-204ENST00000478507 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
TDP2-204ENST00000478507 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
TDP2-204ENST00000478507 SIK1P57059 783 aa17.78■□□□□ 0.44
TDP2-204ENST00000478507 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
TDP2-204ENST00000478507 AK7Q96M32 723 aa17.78■□□□□ 0.44
TDP2-204ENST00000478507 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
TDP2-204ENST00000478507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.77■□□□□ 0.44
TDP2-204ENST00000478507 SSFA2P28290 1259 aa17.77■□□□□ 0.44
TDP2-204ENST00000478507 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
TDP2-204ENST00000478507 PLEKHG2Q9H7P9 1386 aa17.77■□□□□ 0.43
TDP2-204ENST00000478507 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
TDP2-204ENST00000478507 PHF14O94880 888 aa17.75■□□□□ 0.43
TDP2-204ENST00000478507 PHKG2P15735 406 aa17.75■□□□□ 0.43
TDP2-204ENST00000478507 ITPK1Q13572 414 aa17.75■□□□□ 0.43
TDP2-204ENST00000478507 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
TDP2-204ENST00000478507 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
TDP2-204ENST00000478507 ZNF831Q5JPB2 1677 aa17.74■□□□□ 0.43
TDP2-204ENST00000478507 KDRP35968 1356 aa17.74■□□□□ 0.43
TDP2-204ENST00000478507 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
TDP2-204ENST00000478507 CICQ96RK0 1608 aaPredicted RBP17.73■□□□□ 0.43
TDP2-204ENST00000478507 KIAA1551Q9HCM1 1747 aa17.73■□□□□ 0.43
TDP2-204ENST00000478507 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
TDP2-204ENST00000478507 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
TDP2-204ENST00000478507 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
TDP2-204ENST00000478507 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms