RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 AVPP01185 164 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 TRIM50Q86XT4 487 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
SMARCA1-204ENST00000478420 CTC1Q2NKJ3 1217 aa7.62□□□□□ -1.19
SMARCA1-204ENST00000478420 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 ADD1P35611 737 aaKnown RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 CBLBQ13191 982 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 KANK4Q5T7N3 995 aaPredicted RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 PBXIP1Q96AQ6 731 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 OSBPL3Q9H4L5 887 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 PPP1R15AO75807 674 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 GTF2IP78347 998 aa7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 Q6ZVU0 165 aa7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 AXIN1O15169 862 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 ADH1AP07327 375 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 RASA1P20936 1047 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 PSME1Q06323 249 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 UPP2O95045 317 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 TSEN34Q9BSV6 310 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 DNAAF2Q9NVR5 837 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 GNRH1P01148 92 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 CLDN10P78369 228 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 RELBQ01201 579 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 AGBL1Q96MI9 1066 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 LCE2BO14633 110 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 PTGIRP43119 386 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L12C9JPN9 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L21D6R901 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ATG7O95352 703 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 PTK7Q13308 1070 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 SCARF1Q14162 830 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 CCDC102BQ68D86 513 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ARHGEF10LQ9HCE6 1279 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 BMP2P12643 396 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 BMP1P13497 986 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 GDF10P55107 478 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 SIX5Q8N196 739 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 ZNF395Q9H8N7 513 aaPredicted RBP7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 MEN1O00255 615 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 SPINT1O43278 529 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 STAU1O95793 577 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 INHAP05111 366 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 SCNN1DP51172 638 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 DPYDQ12882 1025 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 CLN3Q13286 438 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 ELOAQ14241 798 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 PURBQ96QR8 312 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 BACH1O14867 736 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 SEC13P55735 322 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms