RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNX21-210ENST00000478230 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
SNX21-210ENST00000478230 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
SNX21-210ENST00000478230 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
SNX21-210ENST00000478230 SBF2Q86WG5 1849 aa20.47■□□□□ 0.87
SNX21-210ENST00000478230 KCNQ2O43526 872 aa20.46■□□□□ 0.87
SNX21-210ENST00000478230 PLEKHG2Q9H7P9 1386 aa20.46■□□□□ 0.87
SNX21-210ENST00000478230 MEGF6O75095 1541 aa20.45■□□□□ 0.86
SNX21-210ENST00000478230 R3HDM1Q15032 1099 aaKnown RBP20.44■□□□□ 0.86
SNX21-210ENST00000478230 CC2D1BQ5T0F9 858 aaKnown RBP20.44■□□□□ 0.86
SNX21-210ENST00000478230 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
SNX21-210ENST00000478230 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
SNX21-210ENST00000478230 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
SNX21-210ENST00000478230 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
SNX21-210ENST00000478230 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
SNX21-210ENST00000478230 RGPD3A6NKT7 1758 aaPredicted RBP20.42■□□□□ 0.86
SNX21-210ENST00000478230 RGPD4Q7Z3J3 1758 aa20.42■□□□□ 0.86
SNX21-210ENST00000478230 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
SNX21-210ENST00000478230 PTF1AQ7RTS3 328 aa20.42■□□□□ 0.86
SNX21-210ENST00000478230 KAT6BQ8WYB5 2073 aa20.41■□□□□ 0.86
SNX21-210ENST00000478230 MTHFSP49914 203 aa20.41■□□□□ 0.86
SNX21-210ENST00000478230 IGSF1Q8N6C5 1336 aa20.41■□□□□ 0.86
SNX21-210ENST00000478230 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
SNX21-210ENST00000478230 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
SNX21-210ENST00000478230 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
SNX21-210ENST00000478230 SLC27A3Q5K4L6 730 aa20.39■□□□□ 0.85
SNX21-210ENST00000478230 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
SNX21-210ENST00000478230 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
SNX21-210ENST00000478230 RREB1Q92766 1687 aa20.38■□□□□ 0.85
SNX21-210ENST00000478230 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
SNX21-210ENST00000478230 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
SNX21-210ENST00000478230 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
SNX21-210ENST00000478230 PROM2Q8N271 834 aa20.37■□□□□ 0.85
SNX21-210ENST00000478230 CYP27B1O15528 508 aa20.36■□□□□ 0.85
SNX21-210ENST00000478230 IL13P35225 146 aa20.36■□□□□ 0.85
SNX21-210ENST00000478230 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
SNX21-210ENST00000478230 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
SNX21-210ENST00000478230 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
SNX21-210ENST00000478230 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
SNX21-210ENST00000478230 SMARCC1Q92922 1105 aaPredicted RBP20.34■□□□□ 0.85
SNX21-210ENST00000478230 CNGB1Q14028 1251 aaPredicted RBP20.33■□□□□ 0.85
SNX21-210ENST00000478230 SLC15A2Q16348 729 aa20.33■□□□□ 0.85
SNX21-210ENST00000478230 PHKG2P15735 406 aa20.32■□□□□ 0.84
SNX21-210ENST00000478230 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
SNX21-210ENST00000478230 BTAF1O14981 1849 aa20.32■□□□□ 0.84
SNX21-210ENST00000478230 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
SNX21-210ENST00000478230 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
SNX21-210ENST00000478230 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
SNX21-210ENST00000478230 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
SNX21-210ENST00000478230 SPON1Q9HCB6 807 aa20.3■□□□□ 0.84
SNX21-210ENST00000478230 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
SNX21-210ENST00000478230 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
SNX21-210ENST00000478230 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
SNX21-210ENST00000478230 DOT1LQ8TEK3 1739 aa20.28■□□□□ 0.84
SNX21-210ENST00000478230 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
SNX21-210ENST00000478230 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
SNX21-210ENST00000478230 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
SNX21-210ENST00000478230 KDRP35968 1356 aa20.28■□□□□ 0.84
SNX21-210ENST00000478230 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
SNX21-210ENST00000478230 LRP5O75197 1615 aa20.25■□□□□ 0.83
SNX21-210ENST00000478230 AEBP1Q8IUX7 1158 aa20.25■□□□□ 0.83
SNX21-210ENST00000478230 PIGBQ92521 554 aa20.25■□□□□ 0.83
SNX21-210ENST00000478230 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
SNX21-210ENST00000478230 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
SNX21-210ENST00000478230 CABP4P57796 275 aa20.23■□□□□ 0.83
SNX21-210ENST00000478230 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
SNX21-210ENST00000478230 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
SNX21-210ENST00000478230 PPP1R1BQ9UD71 204 aaPredicted RBP20.23■□□□□ 0.83
SNX21-210ENST00000478230 HMOX1P09601 288 aa20.22■□□□□ 0.83
SNX21-210ENST00000478230 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
SNX21-210ENST00000478230 SLC16A10Q8TF71 515 aa20.22■□□□□ 0.83
SNX21-210ENST00000478230 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
SNX21-210ENST00000478230 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
SNX21-210ENST00000478230 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
SNX21-210ENST00000478230 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
SNX21-210ENST00000478230 SIK1P57059 783 aa20.18■□□□□ 0.82
SNX21-210ENST00000478230 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
SNX21-210ENST00000478230 LY75O60449 1722 aa20.18■□□□□ 0.82
SNX21-210ENST00000478230 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
SNX21-210ENST00000478230 RALBP1Q15311 655 aa20.17■□□□□ 0.82
SNX21-210ENST00000478230 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
SNX21-210ENST00000478230 ITGB4P16144 1822 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 ZBTB7AO95365 584 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 NEFMP07197 916 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 KCNQ4P56696 695 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 ASAP1Q9ULH1 1129 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 PAPPAQ13219 1627 aa20.16■□□□□ 0.82
SNX21-210ENST00000478230 FCHSD2O94868 740 aa20.15■□□□□ 0.82
SNX21-210ENST00000478230 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
SNX21-210ENST00000478230 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNX21-210ENST00000478230 AK7Q96M32 723 aa20.15■□□□□ 0.82
SNX21-210ENST00000478230 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
SNX21-210ENST00000478230 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
SNX21-210ENST00000478230 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
SNX21-210ENST00000478230 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
SNX21-210ENST00000478230 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.81
SNX21-210ENST00000478230 ATF5Q9Y2D1 282 aaPredicted RBP20.14■□□□□ 0.81
SNX21-210ENST00000478230 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
SNX21-210ENST00000478230 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
SNX21-210ENST00000478230 DCAF8L1A6NGE4 600 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms