RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
COL13A1-207ENST00000478219 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
COL13A1-207ENST00000478219 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
COL13A1-207ENST00000478219 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
COL13A1-207ENST00000478219 SYAP1Q96A49 352 aaPredicted RBP11.91□□□□□ -0.5
COL13A1-207ENST00000478219 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
COL13A1-207ENST00000478219 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
COL13A1-207ENST00000478219 ANKRD36BQ8N2N9 1353 aa11.91□□□□□ -0.5
COL13A1-207ENST00000478219 DTNBO60941 627 aa11.9□□□□□ -0.5
COL13A1-207ENST00000478219 VAMP4O75379 141 aa11.9□□□□□ -0.5
COL13A1-207ENST00000478219 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
COL13A1-207ENST00000478219 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
COL13A1-207ENST00000478219 IL16Q14005 1332 aa11.9□□□□□ -0.5
COL13A1-207ENST00000478219 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
COL13A1-207ENST00000478219 PIK3R4Q99570 1358 aa11.9□□□□□ -0.51
COL13A1-207ENST00000478219 TET3O43151 1660 aa11.9□□□□□ -0.51
COL13A1-207ENST00000478219 ABCC1P33527 1531 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 ST7Q9NRC1 585 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 CAPN2P17655 700 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
COL13A1-207ENST00000478219 TERF2Q15554 542 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 ABCC4O15439 1325 aa11.89□□□□□ -0.51
COL13A1-207ENST00000478219 MAP3K4Q9Y6R4 1608 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 PHF14O94880 888 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
COL13A1-207ENST00000478219 PTGS1P23219 599 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
COL13A1-207ENST00000478219 LRMPQ12912 555 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 CUL4AQ13619 759 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
COL13A1-207ENST00000478219 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 CCDC183Q5T5S1 534 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 FUCA2Q9BTY2 467 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 PLCH2O75038 1416 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 ARAP3Q8WWN8 1544 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 REREQ9P2R6 1566 aa11.88□□□□□ -0.51
COL13A1-207ENST00000478219 MX1P20591 662 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
COL13A1-207ENST00000478219 TMEM132AQ24JP5 1023 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 TSHZ3Q63HK5 1081 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 COL3A1P02461 1466 aaPredicted RBP11.87□□□□□ -0.51
COL13A1-207ENST00000478219 TRERF1Q96PN7 1200 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 UPF3BQ9BZI7 483 aaKnown RBP11.87□□□□□ -0.51
COL13A1-207ENST00000478219 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
COL13A1-207ENST00000478219 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
COL13A1-207ENST00000478219 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
COL13A1-207ENST00000478219 ERC2O15083 957 aa11.86□□□□□ -0.51
COL13A1-207ENST00000478219 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
COL13A1-207ENST00000478219 REC8O95072 547 aa11.86□□□□□ -0.51
COL13A1-207ENST00000478219 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL13A1-207ENST00000478219 NRBP1Q9UHY1 535 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 V9GYY5 206 aaPredicted RBP11.85□□□□□ -0.51
COL13A1-207ENST00000478219 MYOM2P54296 1465 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 FBLN1P23142 703 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 CERS3Q8IU89 383 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
COL13A1-207ENST00000478219 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
COL13A1-207ENST00000478219 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
COL13A1-207ENST00000478219 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
COL13A1-207ENST00000478219 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 CABP2Q9NPB3 220 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
COL13A1-207ENST00000478219 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.51
COL13A1-207ENST00000478219 FIBPO43427 364 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 TNNT1P13805 278 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
COL13A1-207ENST00000478219 INTS4Q96HW7 963 aaKnown RBP11.83□□□□□ -0.52
COL13A1-207ENST00000478219 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 ZFYVE16Q7Z3T8 1539 aa11.83□□□□□ -0.52
COL13A1-207ENST00000478219 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 ZC3H13Q5T200 1668 aaKnown RBP11.82□□□□□ -0.52
COL13A1-207ENST00000478219 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
COL13A1-207ENST00000478219 KIF1BO60333 1816 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 SMTNL1A8MU46 457 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 TULP2O00295 520 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 PRKAR2BP31323 418 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
COL13A1-207ENST00000478219 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
COL13A1-207ENST00000478219 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms