RNA–Protein interactions for RNA: ENST00000478094.1

SMS-204, Transcript of spermine synthase, humanhuman

TSL 4

Gene SMS, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-204ENST00000478094 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
SMS-204ENST00000478094 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
SMS-204ENST00000478094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMS-204ENST00000478094 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
SMS-204ENST00000478094 NME9Q86XW9 330 aa17.03■□□□□ 0.32
SMS-204ENST00000478094 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.31
SMS-204ENST00000478094 KIF3CO14782 793 aa17.01■□□□□ 0.31
SMS-204ENST00000478094 APLP1P51693 650 aa17.01■□□□□ 0.31
SMS-204ENST00000478094 USP47Q96K76 1375 aa17.01■□□□□ 0.31
SMS-204ENST00000478094 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
SMS-204ENST00000478094 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
SMS-204ENST00000478094 C5P01031 1676 aa17■□□□□ 0.31
SMS-204ENST00000478094 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
SMS-204ENST00000478094 IP6K1Q92551 441 aa16.99■□□□□ 0.31
SMS-204ENST00000478094 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
SMS-204ENST00000478094 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
SMS-204ENST00000478094 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
SMS-204ENST00000478094 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
SMS-204ENST00000478094 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
SMS-204ENST00000478094 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
SMS-204ENST00000478094 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
SMS-204ENST00000478094 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
SMS-204ENST00000478094 MEGF6O75095 1541 aa16.95■□□□□ 0.3
SMS-204ENST00000478094 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
SMS-204ENST00000478094 TOMM70O94826 608 aa16.93■□□□□ 0.3
SMS-204ENST00000478094 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
SMS-204ENST00000478094 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
SMS-204ENST00000478094 C4BP0C0L5 1744 aa16.91■□□□□ 0.3
SMS-204ENST00000478094 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 NSD3Q9BZ95 1437 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 HOXC9P31274 260 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
SMS-204ENST00000478094 A0A1W2PP64 1363 aa16.89■□□□□ 0.3
SMS-204ENST00000478094 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.3
SMS-204ENST00000478094 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
SMS-204ENST00000478094 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
SMS-204ENST00000478094 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
SMS-204ENST00000478094 WDR90Q96KV7 1748 aa16.88■□□□□ 0.29
SMS-204ENST00000478094 AK7Q96M32 723 aa16.88■□□□□ 0.29
SMS-204ENST00000478094 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
SMS-204ENST00000478094 AMPHP49418 695 aa16.87■□□□□ 0.29
SMS-204ENST00000478094 AMIGO3Q86WK7 504 aa16.87■□□□□ 0.29
SMS-204ENST00000478094 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
SMS-204ENST00000478094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
SMS-204ENST00000478094 COL13A1Q5TAT6 717 aaPredicted RBP16.85■□□□□ 0.29
SMS-204ENST00000478094 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
SMS-204ENST00000478094 RAPGEF4Q8WZA2 1011 aa16.85■□□□□ 0.29
SMS-204ENST00000478094 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
SMS-204ENST00000478094 PCDH11XQ9BZA7 1347 aa16.85■□□□□ 0.29
SMS-204ENST00000478094 PCDH11YQ9BZA8 1340 aa16.85■□□□□ 0.29
SMS-204ENST00000478094 PHF14O94880 888 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 SSFA2P28290 1259 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 NBPF6Q5VWK0 638 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
SMS-204ENST00000478094 KLRG1Q96E93 195 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 COG3Q96JB2 828 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 NBPF4Q96M43 638 aa16.84■□□□□ 0.29
SMS-204ENST00000478094 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.28
SMS-204ENST00000478094 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
SMS-204ENST00000478094 PUS7Q96PZ0 661 aaKnown RBP16.83■□□□□ 0.28
SMS-204ENST00000478094 KIF13BQ9NQT8 1826 aa16.83■□□□□ 0.28
SMS-204ENST00000478094 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
SMS-204ENST00000478094 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
SMS-204ENST00000478094 NMRK2Q9NPI5 230 aa16.82■□□□□ 0.28
SMS-204ENST00000478094 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
SMS-204ENST00000478094 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
SMS-204ENST00000478094 ITGB4P16144 1822 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 CAPN15O75808 1086 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 PRELPP51888 382 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 TGFB2P61812 414 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 FSTL1Q12841 308 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 TNS4Q8IZW8 715 aa16.8■□□□□ 0.28
SMS-204ENST00000478094 FBLN1P23142 703 aa16.79■□□□□ 0.28
SMS-204ENST00000478094 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
SMS-204ENST00000478094 CYP27B1O15528 508 aa16.78■□□□□ 0.28
SMS-204ENST00000478094 MMP10P09238 476 aa16.78■□□□□ 0.28
SMS-204ENST00000478094 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
SMS-204ENST00000478094 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
SMS-204ENST00000478094 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
SMS-204ENST00000478094 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 SIK1P57059 783 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 HTRA3P83110 453 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 PIGBQ92521 554 aa16.77■□□□□ 0.28
SMS-204ENST00000478094 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
SMS-204ENST00000478094 GNPATO15228 680 aa16.76■□□□□ 0.27
SMS-204ENST00000478094 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
SMS-204ENST00000478094 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
SMS-204ENST00000478094 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
SMS-204ENST00000478094 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
SMS-204ENST00000478094 INSRP06213 1382 aa16.75■□□□□ 0.27
SMS-204ENST00000478094 PCNTO95613 3336 aa16.75■□□□□ 0.27
SMS-204ENST00000478094 NKX1-1Q15270 411 aaPredicted RBP16.74■□□□□ 0.27
SMS-204ENST00000478094 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
SMS-204ENST00000478094 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms