RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 VSIG8P0DPA2 414 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 KRI1Q8N9T8 703 aaKnown RBP7□□□□□ -1.29
SF3B6-202ENST00000478050 SIN3AQ96ST3 1273 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 UNC93B1Q9H1C4 597 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 MAP3K4Q9Y6R4 1608 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 DISP1Q96F81 1524 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 TONSLQ96HA7 1378 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 MADDQ8WXG6 1647 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 IRF6O14896 467 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 PPP1R15AO75807 674 aaPredicted RBP6.99□□□□□ -1.29
SF3B6-202ENST00000478050 FDX1P10109 184 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 TMEM151AQ8N4L1 468 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 EVA1BQ9NVM1 165 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 ABCC2Q92887 1545 aa6.99□□□□□ -1.29
SF3B6-202ENST00000478050 CROCC2H7BZ55 1655 aa6.98□□□□□ -1.29
SF3B6-202ENST00000478050 TIMP2P16035 220 aa6.98□□□□□ -1.29
SF3B6-202ENST00000478050 PTPRNQ16849 979 aa6.98□□□□□ -1.29
SF3B6-202ENST00000478050 MPNDQ8N594 471 aa6.98□□□□□ -1.29
SF3B6-202ENST00000478050 CLCN1P35523 988 aa6.97□□□□□ -1.29
SF3B6-202ENST00000478050 KCNH2Q12809 1159 aa6.97□□□□□ -1.29
SF3B6-202ENST00000478050 ZNF511Q8NB15 262 aa6.97□□□□□ -1.29
SF3B6-202ENST00000478050 GPCPD1Q9NPB8 672 aa6.97□□□□□ -1.29
SF3B6-202ENST00000478050 NUP153P49790 1475 aaKnown RBP6.97□□□□□ -1.29
SF3B6-202ENST00000478050 MINK1Q8N4C8 1332 aaPredicted RBP6.97□□□□□ -1.29
SF3B6-202ENST00000478050 ROCK1Q13464 1354 aa6.96□□□□□ -1.29
SF3B6-202ENST00000478050 BCORL1Q5H9F3 1711 aa6.96□□□□□ -1.29
SF3B6-202ENST00000478050 PTPRTO14522 1441 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 PTPRGP23470 1445 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 GDF11O95390 407 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 TMEM132AQ24JP5 1023 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 C6orf118Q5T5N4 469 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 FAM174AQ8TBP5 190 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 RIMS1Q86UR5 1692 aaKnown RBP6.96□□□□□ -1.3
SF3B6-202ENST00000478050 KDM5BQ9UGL1 1544 aa6.96□□□□□ -1.3
SF3B6-202ENST00000478050 POLR1AO95602 1720 aaPredicted RBP6.96□□□□□ -1.3
SF3B6-202ENST00000478050 DAPK1P53355 1430 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 UPP2O95045 317 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 HSPA1LP34931 641 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 ARID5BQ14865 1188 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3B6-202ENST00000478050 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
SF3B6-202ENST00000478050 PCDHGC3Q9UN70 934 aa6.95□□□□□ -1.3
SF3B6-202ENST00000478050 CDK11AQ9UQ88 783 aaPredicted RBP6.95□□□□□ -1.3
SF3B6-202ENST00000478050 TROQ12816 1431 aaPredicted RBP6.94□□□□□ -1.3
SF3B6-202ENST00000478050 CARMIL2Q6F5E8 1435 aa6.94□□□□□ -1.3
SF3B6-202ENST00000478050 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
SF3B6-202ENST00000478050 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
SF3B6-202ENST00000478050 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
SF3B6-202ENST00000478050 CTHP32929 405 aa6.94□□□□□ -1.3
SF3B6-202ENST00000478050 RASSF7Q02833 373 aa6.94□□□□□ -1.3
SF3B6-202ENST00000478050 CDC42BPAQ5VT25 1732 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 DENND4BO75064 1496 aaPredicted RBP6.93□□□□□ -1.3
SF3B6-202ENST00000478050 CCER2I3L3R5 266 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 BMP2P12643 396 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 PRR7Q8TB68 274 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 LTBP4Q8N2S1 1624 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 ABCC5O15440 1437 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 CD109Q6YHK3 1445 aa6.93□□□□□ -1.3
SF3B6-202ENST00000478050 ABCA8O94911 1581 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 KIF14Q15058 1648 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 GSK3AP49840 483 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 DDX10Q13206 875 aaKnown RBP6.92□□□□□ -1.3
SF3B6-202ENST00000478050 CCDC102AQ96A19 550 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 KLF16Q9BXK1 252 aaPredicted RBP6.92□□□□□ -1.3
SF3B6-202ENST00000478050 ZFAND3Q9H8U3 227 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 RRP7BPQ9NSQ0 103 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 ADGRL2O95490 1459 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
SF3B6-202ENST00000478050 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
SF3B6-202ENST00000478050 ITPKCQ96DU7 683 aa6.91□□□□□ -1.3
SF3B6-202ENST00000478050 CHIC2Q9UKJ5 165 aa6.91□□□□□ -1.3
SF3B6-202ENST00000478050 ADAMTS8Q9UP79 889 aa6.91□□□□□ -1.3
SF3B6-202ENST00000478050 POGZQ7Z3K3 1410 aa6.91□□□□□ -1.3
SF3B6-202ENST00000478050 ANP32CO43423 234 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 PIP4K2BP78356 416 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 NR5A1Q13285 461 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 AGERQ15109 404 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 ERICH6Q7L0X2 663 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 CNTNAP3BQ96NU0 1288 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 CDK15Q96Q40 435 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 MPHOSPH9Q99550 1183 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 CNTNAP3Q9BZ76 1288 aa6.9□□□□□ -1.3
SF3B6-202ENST00000478050 RPRD2Q5VT52 1461 aaKnown RBP6.9□□□□□ -1.31
SF3B6-202ENST00000478050 GPATCH8Q9UKJ3 1502 aaKnown RBP6.9□□□□□ -1.31
SF3B6-202ENST00000478050 SPTLC1O15269 473 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 NDUFV2P19404 249 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 MTMR2Q13614 643 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 XP32Q5T750 250 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 DESI1Q6ICB0 168 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 C14orf37Q86TY3 774 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
SF3B6-202ENST00000478050 STRCQ7RTU9 1775 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 UHRF1BP1LA0JNW5 1464 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 UHRF1BP1Q6BDS2 1440 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 ANKRD30BQ9BXX2 1392 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 TOM1O60784 492 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 SPIRE2Q8WWL2 714 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms