RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 OVOS2A0A0J9YW53 1432 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 OVOS2Q6IE36 1432 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 PUS7Q96PZ0 661 aaKnown RBP11.55□□□□□ -0.56
ERCC8-205ENST00000477893 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
ERCC8-205ENST00000477893 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 TRIM37O94972 964 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-205ENST00000477893 COG3Q96JB2 828 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 LTN1O94822 1766 aa11.54□□□□□ -0.56
ERCC8-205ENST00000477893 FBLN1P23142 703 aa11.53□□□□□ -0.56
ERCC8-205ENST00000477893 BAG6P46379 1132 aa11.53□□□□□ -0.56
ERCC8-205ENST00000477893 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
ERCC8-205ENST00000477893 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
ERCC8-205ENST00000477893 THRAP3Q9Y2W1 955 aaKnown RBP11.53□□□□□ -0.56
ERCC8-205ENST00000477893 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
ERCC8-205ENST00000477893 MYOM1P52179 1685 aa11.52□□□□□ -0.56
ERCC8-205ENST00000477893 RGPD1P0DJD0 1748 aa11.52□□□□□ -0.56
ERCC8-205ENST00000477893 ST18O60284 1047 aa11.52□□□□□ -0.57
ERCC8-205ENST00000477893 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.57
ERCC8-205ENST00000477893 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
ERCC8-205ENST00000477893 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.57
ERCC8-205ENST00000477893 PARP4Q9UKK3 1724 aaKnown RBP11.52□□□□□ -0.57
ERCC8-205ENST00000477893 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
ERCC8-205ENST00000477893 EIF4G2P78344 907 aaKnown RBP eCLIP11.51□□□□□ -0.57
ERCC8-205ENST00000477893 DDB1Q16531 1140 aa11.51□□□□□ -0.57
ERCC8-205ENST00000477893 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
ERCC8-205ENST00000477893 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
ERCC8-205ENST00000477893 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
ERCC8-205ENST00000477893 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
ERCC8-205ENST00000477893 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
ERCC8-205ENST00000477893 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
ERCC8-205ENST00000477893 ERBB3P21860 1342 aa11.5□□□□□ -0.57
ERCC8-205ENST00000477893 ABCC6O95255 1503 aa11.5□□□□□ -0.57
ERCC8-205ENST00000477893 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
ERCC8-205ENST00000477893 APBA3O96018 575 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 AMPHP49418 695 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 MIER1Q8N108 512 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 OVOS2A0A0G2JMS6 1433 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
ERCC8-205ENST00000477893 FYB1O15117 783 aa11.48□□□□□ -0.57
ERCC8-205ENST00000477893 EZH2Q15910 746 aaKnown RBP11.48□□□□□ -0.57
ERCC8-205ENST00000477893 PROM2Q8N271 834 aa11.48□□□□□ -0.57
ERCC8-205ENST00000477893 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
ERCC8-205ENST00000477893 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
ERCC8-205ENST00000477893 DISP2A7MBM2 1401 aa11.47□□□□□ -0.57
ERCC8-205ENST00000477893 HOXC9P31274 260 aa11.47□□□□□ -0.57
ERCC8-205ENST00000477893 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
ERCC8-205ENST00000477893 IP6K1Q92551 441 aa11.47□□□□□ -0.57
ERCC8-205ENST00000477893 IER5LQ5T953 404 aa11.46□□□□□ -0.57
ERCC8-205ENST00000477893 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 EXOC5O00471 708 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
ERCC8-205ENST00000477893 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
ERCC8-205ENST00000477893 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
ERCC8-205ENST00000477893 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 PEAK1Q9H792 1746 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 SRCAPQ6ZRS2 3230 aa11.45□□□□□ -0.58
ERCC8-205ENST00000477893 IL2RBP14784 551 aa11.44□□□□□ -0.58
ERCC8-205ENST00000477893 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
ERCC8-205ENST00000477893 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
ERCC8-205ENST00000477893 RTL1A6NKG5 1358 aa11.43□□□□□ -0.58
ERCC8-205ENST00000477893 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
ERCC8-205ENST00000477893 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
ERCC8-205ENST00000477893 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
ERCC8-205ENST00000477893 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
ERCC8-205ENST00000477893 C11orf95C9JLR9 678 aaPredicted RBP11.42□□□□□ -0.58
ERCC8-205ENST00000477893 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
ERCC8-205ENST00000477893 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
ERCC8-205ENST00000477893 PANK3Q9H999 370 aa11.42□□□□□ -0.58
ERCC8-205ENST00000477893 FAM208AQ9UK61 1670 aaKnown RBP11.42□□□□□ -0.58
ERCC8-205ENST00000477893 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
ERCC8-205ENST00000477893 FLT4P35916 1363 aa11.41□□□□□ -0.58
ERCC8-205ENST00000477893 MEGF6O75095 1541 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 KCNQ2O43526 872 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
ERCC8-205ENST00000477893 NUP188Q5SRE5 1749 aa11.4□□□□□ -0.58
ERCC8-205ENST00000477893 RREB1Q92766 1687 aa11.4□□□□□ -0.59
ERCC8-205ENST00000477893 CNGB1Q14028 1251 aaPredicted RBP11.39□□□□□ -0.59
ERCC8-205ENST00000477893 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
ERCC8-205ENST00000477893 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
ERCC8-205ENST00000477893 PARD3Q8TEW0 1356 aa11.39□□□□□ -0.59
ERCC8-205ENST00000477893 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
ERCC8-205ENST00000477893 SYTL4Q96C24 671 aaPredicted RBP11.38□□□□□ -0.59
ERCC8-205ENST00000477893 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
ERCC8-205ENST00000477893 INSRP06213 1382 aa11.38□□□□□ -0.59
ERCC8-205ENST00000477893 NHSQ6T4R5 1651 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms